RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 MBD2Q9UBB5 411 aa5.91□□□□□ -1.46
LRCH3-212ENST00000466845 CPSF3Q9UKF6 684 aaKnown RBP5.91□□□□□ -1.46
LRCH3-212ENST00000466845 RCOR1Q9UKL0 485 aa5.91□□□□□ -1.46
LRCH3-212ENST00000466845 SCAF8Q9UPN6 1271 aaKnown RBP5.91□□□□□ -1.46
LRCH3-212ENST00000466845 NUP155O75694 1391 aa5.91□□□□□ -1.46
LRCH3-212ENST00000466845 NOS1P29475 1434 aa5.91□□□□□ -1.46
LRCH3-212ENST00000466845 NCOA3Q9Y6Q9 1424 aa5.91□□□□□ -1.46
LRCH3-212ENST00000466845 TRIM43BA6NCK2 446 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 NCF1BA6NI72 391 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 NCF1CA8MVU1 366 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 TARM1B6A8C7 271 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 NT5C1B-RDH14C9J2C7 533 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 NDUFS8O00217 210 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PROM1O43490 865 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PCDHGA12O60330 932 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 CIDEAO60543 219 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 ZC3H11AO75152 810 aaKnown RBP eCLIP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 REC8O95072 547 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 KLHL2O95198 593 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 JUNP05412 331 aaKnown RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 QDPRP09417 244 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PRKAR1AP10644 381 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 MYL4P12829 197 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 IFNAR1P17181 557 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PRKACBP22694 351 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 CTNNA2P26232 953 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 ADSSP30520 456 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 MAPK4P31152 587 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 IL15P40933 162 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 NEK4P51957 841 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PPP5CP53041 499 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 KCNJ10P78508 379 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 KDSRQ06136 332 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 HSPA14Q0VDF9 509 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 CAMK2DQ13557 499 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 RIN1Q13671 783 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 COTL1Q14019 142 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 CYLC2Q14093 348 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 EFR3AQ14156 821 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 HABP2Q14520 560 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 SLC39A12Q504Y0 691 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 TDRD12Q587J7 1177 aaKnown RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 IZUMO3Q5VZ72 239 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PAPD4Q6PIY7 484 aaKnown RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 GPR142Q7Z601 462 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 WDR63Q8IWG1 891 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 D2HGDHQ8N465 521 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 ZNF321PQ8N8H1 164 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PLA2G15Q8NCC3 412 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 C1orf162Q8NEQ5 155 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 ANKS1AQ92625 1134 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 SYN2Q92777 582 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 ATP6V0A1Q93050 837 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 FAM149B1Q96BN6 582 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 TRIM43Q96BQ3 446 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 ZNF503Q96F45 646 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 SNF8Q96H20 258 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 ELF4Q99607 663 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 C19orf43Q9BQ61 176 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 SPXQ9BT56 116 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 NFKBIZQ9BYH8 718 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PITHD1Q9GZP4 211 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 TFB2MQ9H5Q4 396 aaKnown RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 HAUS4Q9H6D7 363 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 VTA1Q9NP79 307 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 DMRT3Q9NQL9 472 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 KRT84Q9NSB2 600 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 POLR3BQ9NW08 1133 aaPredicted RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 OXSMQ9NWU1 459 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 NINJ2Q9NZG7 142 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 COX16Q9P0S2 106 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 HESX1Q9UBX0 185 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 ARHGAP26Q9UNA1 814 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PCDHB2Q9Y5E7 798 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PCDHGA9Q9Y5G4 932 aaKnown RBP5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PCDHGA8Q9Y5G5 932 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PCDHGA7Q9Y5G6 932 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PCDHGA6Q9Y5G7 932 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PCDHGA3Q9Y5H0 932 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 PCDHGA2Q9Y5H1 932 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 CAPN7Q9Y6W3 813 aa5.9□□□□□ -1.46
LRCH3-212ENST00000466845 E9PCH4 1651 aa5.9□□□□□ -1.47
LRCH3-212ENST00000466845 PASKQ96RG2 1323 aa5.9□□□□□ -1.47
LRCH3-212ENST00000466845 LRRC7Q96NW7 1537 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 STRCP1A6NGW2 1772 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 CYP3A7-CYP3A51PA0A087WV96 503 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 A0A0A6YYJ9 748 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 A0A0U1RQK1 487 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 A0A1B0GWJ7 208 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 A0A1W2PRX2 142 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 KRTAP23-1A1A580 65 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 ZNF320A2RRD8 509 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 E9PMD0 336 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 H0YIN7 160 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 GOLGA8MH3BSY2 632 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 CA12O43570 354 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 SLC25A17O43808 307 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 CBFA2T3O75081 653 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 CLN5O75503 358 aa5.89□□□□□ -1.47
LRCH3-212ENST00000466845 IDH1O75874 414 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms