RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 MRPL1Q9BYD6 325 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 NFKBIZQ9BYH8 718 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 DRC3Q9H069 523 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 IGSF9Q9P2J2 1179 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 ZDHHC2Q9UIJ5 367 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 FZD10Q9ULW2 581 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 H3BSA7 217 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 SOCS7O14512 581 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 PIGNO95427 931 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 ME2P23368 584 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 PDK1Q15118 436 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 BORAQ6PGQ7 559 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 FAM156AQ8NDB6 213 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 TRPM4Q8TD43 1214 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 PDCD6IPQ8WUM4 868 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 COPS5Q92905 334 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 MFSD3Q96ES6 412 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 MCMBPQ9BTE3 642 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 FAM124BQ9H5Z6 455 aaPredicted RBP13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 LRRC40Q9H9A6 602 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 CEPT1Q9Y6K0 416 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 A0A0G2JMZ2 1700 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 LRRC37A2A6NM11 1700 aa13.24□□□□□ -0.29
PDZRN3-205ENST00000466780 hCG_2014768A0A024R1R8 64 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 KCNK1O00180 336 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 H2AFYO75367 372 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 C22orf31O95567 290 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 TFEBP19484 476 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 PHKA2P46019 1235 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 GRIA4P48058 902 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 IGBP1P78318 339 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 IFRD2Q12894 506 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 KIF12Q96FN5 646 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 ACE2Q9BYF1 805 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 SLC22A2O15244 555 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 ZNF26P17031 533 aaPredicted RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 PTPN1P18031 435 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 EMP3P54852 163 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 NR1H2P55055 460 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 ZYG11AQ6WRX3 759 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 PID1Q7Z2X4 250 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 APOBEC3FQ8IUX4 373 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 CHERPQ8IWX8 916 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 LSMEM2Q8N112 164 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 RNF139Q8WU17 664 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 GAB3Q8WWW8 586 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 NDRG1Q92597 394 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 DLG3Q92796 817 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 SPATA33Q96N06 139 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 C1QTNF1Q9BXJ1 281 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 ZBTB26Q9HCK0 441 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 DNAAF2Q9NVR5 837 aaKnown RBP13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 VANGL2Q9ULK5 521 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 RNF11Q9Y3C5 154 aa13.23□□□□□ -0.29
PDZRN3-205ENST00000466780 CITO14578 2027 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 A0A0J9YVX5 310 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 C7orf72A4D263 438 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 TCAF2A6NFQ2 919 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 TRPA1O75762 1119 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 CDH2P19022 906 aaPredicted RBP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 ADORA2BP29275 332 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 HSPA13P48723 471 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 CSRP3P50461 194 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 HERC3Q15034 1050 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 MGAT5BQ3V5L5 792 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 TREML2Q5T2D2 321 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 STRADAQ7RTN6 431 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 SETD3Q86TU7 594 aaPredicted RBP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 ALDH16A1Q8IZ83 802 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 DDI1Q8WTU0 396 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 SREK1Q8WXA9 508 aaKnown RBP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 VPS39Q96JC1 886 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 NPAS2Q99743 824 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 RCOR3Q9P2K3 495 aaPredicted RBP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 BCAP29Q9UHQ4 241 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 SCN4AP35499 1836 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 ARHGAP10A1A4S6 786 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 HBP1O60381 514 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 TCN1P20061 433 aaPredicted RBP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 NAGLUP54802 743 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 SNX16P57768 344 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 MPP3Q13368 585 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 SH2D4BQ5SQS7 431 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 CERCAMQ5T4B2 595 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 IL23RQ5VWK5 629 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 LIPMQ5VYY2 423 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 ARHGAP17Q68EM7 881 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 KLC3Q6P597 504 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 DLK2Q6UY11 383 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 RIOX2Q8IUF8 465 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 TASP1Q9H6P5 420 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 PADI4Q9UM07 663 aa13.22□□□□□ -0.29
PDZRN3-205ENST00000466780 COPG1Q9Y678 874 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms