RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ATG13O75143 517 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 ZMPSTE24O75844 475 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 TGM2P21980 687 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 ACVRL1P37023 503 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 GEMIN4P57678 1058 aaKnown RBP16.36■□□□□ 0.21
GPC1-207ENST00000466624 SLC20A2Q08357 652 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 PTPRNQ16849 979 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 EGFLAMQ63HQ2 1017 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 IL31Q6EBC2 164 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 RETSATQ6NUM9 610 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 MAMSTRQ6ZN01 415 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 BBS12Q6ZW61 710 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 FBXL6Q8N531 539 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 HMCESQ96FZ2 354 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 CELF6Q96J87 481 aaKnown RBP16.36■□□□□ 0.21
GPC1-207ENST00000466624 MRGPRX3Q96LB0 322 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 SPON2Q9BUD6 331 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.36■□□□□ 0.21
GPC1-207ENST00000466624 SLC25A13Q9UJS0 675 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 PLA2G4CQ9UP65 541 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 ERVW-1Q9UQF0 538 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 HS3ST2Q9Y278 367 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 MFHAS1Q9Y4C4 1052 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 SHROOM3Q8TF72 1996 aa16.36■□□□□ 0.21
GPC1-207ENST00000466624 KMT2EQ8IZD2 1858 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 CBX4O00257 560 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 MFSD11O43934 449 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 CST8O60676 142 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 GPR37L1O60883 481 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 KRT10P13645 584 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 MX2P20592 715 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 TIE1P35590 1138 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 NR2C2P49116 596 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 PAPOLAP51003 745 aaKnown RBP16.35■□□□□ 0.21
GPC1-207ENST00000466624 CLCN6P51797 869 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 SEC13P55735 322 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 ST8SIA6P61647 398 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 GALNT2Q10471 571 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 ZNF234Q14588 700 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 SEL1L2Q5TEA6 688 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 EMC10Q5UCC4 262 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 BZW1Q7L1Q6 419 aaKnown RBP16.35■□□□□ 0.21
GPC1-207ENST00000466624 METTL3Q86U44 580 aaKnown RBP16.35■□□□□ 0.21
GPC1-207ENST00000466624 IL17RCQ8NAC3 791 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 CASKIN2Q8WXE0 1202 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 MYO19Q96H55 970 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 GABRG3Q99928 467 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 TMEM245Q9H330 911 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 DTLQ9NZJ0 730 aa16.35■□□□□ 0.21
GPC1-207ENST00000466624 PRR33A8MZF0 331 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 APOC4-APOC2K7ER74 178 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 DFFAO00273 331 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 KCNK3O14649 394 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 SNAP91O60641 907 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 PRAMEF11O60813 436 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 TJP3O95049 919 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 APOC2P02655 101 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 NTSR1P30989 418 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 NNMTP40261 264 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 CTSOP43234 321 aaPredicted RBP16.34■□□□□ 0.21
GPC1-207ENST00000466624 DNA2P51530 1060 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 GNG11P61952 73 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 ARF5P84085 180 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 ZNF33AQ06730 810 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 IL10RBQ08334 325 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 ZNF211Q13398 564 aaPredicted RBP16.34■□□□□ 0.21
GPC1-207ENST00000466624 INO80DQ53TQ3 878 aaPredicted RBP16.34■□□□□ 0.21
GPC1-207ENST00000466624 C2orf27AQ580R0 203 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 EOGTQ5NDL2 527 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 KAZNQ674X7 775 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 Q6ZS52 159 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 CHPFQ8IZ52 775 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 SPEM1Q8N4L4 309 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 SH2D3CQ8N5H7 860 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 RPLP0P6Q8NHW5 317 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 CYB5D2Q8WUJ1 264 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 SORCS1Q8WY21 1168 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 FATE1Q969F0 183 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 C1QTNF1Q9BXJ1 281 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 BRD8Q9H0E9 1235 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 PDFQ9HBH1 243 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 C11orf16Q9NQ32 467 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 MMP17Q9ULZ9 603 aa16.34■□□□□ 0.21
GPC1-207ENST00000466624 ENC1O14682 589 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 PI15O43692 258 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 ATP9BO43861 1147 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 KLF8O95600 359 aaPredicted RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 DCNP07585 359 aaKnown RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 GLDCP23378 1020 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 GARSP41250 739 aaKnown RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 IL12RB1P42701 662 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 SERPINH1P50454 418 aaKnown RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 GBE1Q04446 702 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 ADCY2Q08462 1091 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 SLC10A2Q12908 348 aaPredicted RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 KLF1Q13351 362 aaPredicted RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 GAS6Q14393 721 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 FNDC3BQ53EP0 1204 aaKnown RBP16.33■□□□□ 0.2
GPC1-207ENST00000466624 SDE2Q6IQ49 451 aa16.33■□□□□ 0.2
GPC1-207ENST00000466624 AADACL2Q6P093 401 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms