RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 MATKP42679 507 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 TBX4P57082 545 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 STX3Q13277 289 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 SLC29A2Q14542 456 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 TRIP10Q15642 601 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 NDUFA5Q16718 116 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 WSCD1Q658N2 575 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 PMF1Q6P1K2 205 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 KCNT2Q6UVM3 1135 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 RTL10Q7L3V2 364 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 LIMS2Q7Z4I7 341 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 TMEM40Q8WWA1 233 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 CENPTQ96BT3 561 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 SCLYQ96I15 445 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 RNF157Q96PX1 679 aa7.82□□□□□ -1.16
USP54-210ENST00000466048 CDC42EP4Q9H3Q1 356 aaKnown RBP7.82□□□□□ -1.16
USP54-210ENST00000466048 R3HDM2Q9Y2K5 976 aaKnown RBP7.82□□□□□ -1.16
USP54-210ENST00000466048 WDR91A4D1P6 747 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 H0YGN5 161 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 M0QYT0 321 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 RBP3P10745 1247 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 S100A1P23297 94 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 HMOX2P30519 316 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 MAGEA4P43358 317 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 ADCY1Q08828 1119 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 GTF2H3Q13889 308 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 HIF1AQ16665 826 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 IL31Q6EBC2 164 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 LRRC49Q8IUZ0 686 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 DCTN4Q9UJW0 460 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 OGDHLQ9ULD0 1010 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 NFS1Q9Y697 457 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 KPNA4O00629 521 aaPredicted RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 CCDC130P13994 396 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 S100A5P33763 92 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 MGAT3Q09327 533 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 ARHGEF7Q14155 803 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 LLGL1Q15334 1064 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 GSTA3Q16772 222 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 SMTNL2Q2TAL5 461 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 PLPP4Q5VZY2 271 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 MON1AQ86VX9 555 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 C12orf29Q8N999 325 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 HIPK4Q8NE63 616 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 HDAC11Q96DB2 347 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 FNDC3AQ9Y2H6 1198 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 CASP8AP2Q9UKL3 1982 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 SMIM31A0A1B0GVY4 71 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 CFAP99D6REC4 459 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 ZW10O43264 779 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 LTFP02788 710 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 PMLP29590 882 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 OR1D2P34982 312 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 MAPK8P45983 427 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 MRPL28Q13084 256 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 INPP5AQ14642 412 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 NOMO1Q15155 1222 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 OASLQ15646 514 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 TRMT5Q32P41 509 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 SLC25A52Q3SY17 297 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 BBS9Q3SYG4 887 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 C16orf89Q6UX73 402 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 RBM23Q86U06 439 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 KBTBD7Q8WVZ9 684 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 ARMC5Q96C12 935 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 TUBGCP3Q96CW5 907 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 RXFP1Q9HBX9 757 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 RGS18Q9NS28 235 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 AFF4Q9UHB7 1163 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 RAB23Q9ULC3 237 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 TIMM13Q9Y5L4 95 aaPredicted RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 ARL5CA6NH57 179 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 PAPSS1O43252 624 aaPredicted RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 CBFA2T3O75081 653 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 CLPTM1O96005 669 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 MRPS5P82675 430 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 ATP13A4Q4VNC1 1196 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 RHBDF2Q6PJF5 856 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 PATL1Q86TB9 770 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 ADCK1Q86TW2 530 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 ZDHHC14Q8IZN3 488 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 CPA6Q8N4T0 437 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 DTX3LQ8TDB6 740 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 LPPQ93052 612 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 NECTIN4Q96NY8 510 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 C1QTNF7Q9BXJ2 289 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 TRABDQ9H4I3 376 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 CACYBPQ9HB71 228 aaKnown RBP7.81□□□□□ -1.16
USP54-210ENST00000466048 POPDC2Q9HBU9 364 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 ATXN10Q9UBB4 475 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 AP4E1Q9UPM8 1137 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 NCKAP1Q9Y2A7 1128 aa7.81□□□□□ -1.16
USP54-210ENST00000466048 MGAMO43451 1857 aa7.8□□□□□ -1.16
USP54-210ENST00000466048 MYADML2A6NDP7 307 aa7.8□□□□□ -1.16
USP54-210ENST00000466048 C3orf70A6NLC5 250 aaPredicted RBP7.8□□□□□ -1.16
USP54-210ENST00000466048 PIK3R2O00459 728 aa7.8□□□□□ -1.16
USP54-210ENST00000466048 PPEF2O14830 753 aa7.8□□□□□ -1.16
USP54-210ENST00000466048 GSTA4O15217 222 aa7.8□□□□□ -1.16
USP54-210ENST00000466048 NFATC1O95644 943 aa7.8□□□□□ -1.16
USP54-210ENST00000466048 ADH1CP00326 375 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms