RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 NDUFV1P49821 464 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 TKTL1P51854 596 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 CACNA2D1P54289 1103 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 ROR1Q01973 937 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 OGDHQ02218 1023 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 MTA1Q13330 715 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 SHHQ15465 462 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 TAZQ16635 292 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 CCDC14Q49A88 953 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 SLC39A12Q504Y0 691 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 C2CD6Q53TS8 623 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 ACBD5Q5T8D3 534 aaPredicted RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 CYP4A22Q5TCH4 519 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 MSANTD2Q6P1R3 559 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 KLHDC10Q6PID8 442 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 RNF111Q6ZNA4 994 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 DENND5BQ6ZUT9 1274 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 TCEAL8Q8IYN2 117 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 KATNAL2Q8IYT4 538 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 VPS52Q8N1B4 723 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 SIX6OS1Q8N1H7 587 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 MRPL43Q8N983 215 aaKnown RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 ATAD1Q8NBU5 361 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 MNS1Q8NEH6 495 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 ADCY4Q8NFM4 1077 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 EXD1Q8NHP7 514 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 RIN2Q8WYP3 895 aaPredicted RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 ANAPC16Q96DE5 110 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 TRMT2BQ96GJ1 504 aaKnown RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 MCEEQ96PE7 176 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 KLHL5Q96PQ7 755 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 TGS1Q96RS0 853 aaKnown RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 NAP1L3Q99457 506 aaPredicted RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 ULBP1Q9BZM6 244 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 NSUN3Q9H649 340 aaKnown RBP5.7□□□□□ -1.5
VPS41-211ENST00000466017 CAPN10Q9HC96 672 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 ABCC13Q9NSE7 274 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 TMEM30AQ9NV96 361 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 ERVK13-1Q9NX77 482 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS41-211ENST00000466017 CLIC5Q9NZA1 410 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 ZMYM5Q9UJ78 669 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 STAP1Q9ULZ2 295 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 CDY1Q9Y6F8 540 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 NLRC5Q86WI3 1866 aa5.7□□□□□ -1.5
VPS41-211ENST00000466017 CENPFP49454 3210 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 MYOCOSA0A1B0GUC4 107 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 EFCAB8A8MWE9 144 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 FADS2P1A8MWK0 482 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 H3BNC9 293 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 GOLGA8SH3BPF8 625 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 CCDC188H7C350 402 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 MDM4O15151 490 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 CTIFO43310 598 aaKnown RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 SPOPO43791 374 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 LRCH4O75427 683 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 SLU7O95391 586 aaKnown RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 CXCL14O95715 111 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 TRUB2O95900 331 aaKnown RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 FTCDO95954 541 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 IGLV3-25P01717 112 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 LTFP02788 710 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 EPHX1P07099 455 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 TUBBP07437 444 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 LCP1P13796 627 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 IFNGR1P15260 489 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 YWHAQP27348 245 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 MIPP30301 263 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 HOXA9P31269 272 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 SDC4P31431 198 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 ELF1P32519 619 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 FLT3P36888 993 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 PBX3P40426 434 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 ARSEP51690 589 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 SLC5A3P53794 718 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 PCBP3P57721 371 aaKnown RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 ADIGQ0VDE8 80 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 DUSP4Q13115 394 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 PLD1Q13393 1074 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 COL9A2Q14055 689 aaPredicted RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 SMC1AQ14683 1233 aaKnown RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 PPP2R5DQ14738 602 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 PDK2Q15119 407 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 RAB30Q15771 203 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 PABPC1LQ4VXU2 614 aaKnown RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 C9orf50Q5SZB4 431 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 BSPRYQ5W0U4 402 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 TRNP1Q6NT89 227 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 PRSS55Q6UWB4 352 aaPredicted RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 TMCO2Q7Z6W1 182 aaPredicted RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 SCD5Q86SK9 330 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 DEFB106AQ8N104 65 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 MMGT1Q8N4V1 131 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 ARFGAP1Q8N6T3 406 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 POF1BQ8WVV4 589 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 GOLGA1Q92805 767 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 NTAN1Q96AB6 310 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 RBM41Q96IZ5 413 aaKnown RBP5.69□□□□□ -1.5
VPS41-211ENST00000466017 MAP6Q96JE9 813 aa5.69□□□□□ -1.5
VPS41-211ENST00000466017 DHRS1Q96LJ7 313 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms