RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.68□□□□□ -0.38
CHPF2-202ENST00000465601 HYOU1Q9Y4L1 999 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 SHROOM3Q8TF72 1996 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 H3BRJ5 948 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 DCLK1O15075 740 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 RAMP2O60895 175 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 SIN3BO75182 1162 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 ZMPSTE24O75844 475 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 VAV1P15498 845 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 ERCC2P18074 760 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 AMPD1P23109 780 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 MAN1A1P33908 653 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 CNR2P34972 360 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 ARL4AP40617 200 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 HCAR3P49019 387 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 COPAP53621 1224 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 CDH6P55285 790 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 KRT81Q14533 505 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 DLG2Q15700 870 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 HNRNPA1L2Q32P51 320 aaKnown RBP12.67□□□□□ -0.38
CHPF2-202ENST00000465601 USP39Q53GS9 565 aaKnown RBP12.67□□□□□ -0.38
CHPF2-202ENST00000465601 KIAA1324Q6UXG2 1013 aaKnown RBP12.67□□□□□ -0.38
CHPF2-202ENST00000465601 POLNQ7Z5Q5 900 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 ZNF354CQ86Y25 554 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 NETO2Q8NC67 525 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 OR2T3Q8NH03 318 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 GAB3Q8WWW8 586 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 PTPRN2Q92932 1015 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 CELF6Q96J87 481 aaKnown RBP12.67□□□□□ -0.38
CHPF2-202ENST00000465601 MRGPRX1Q96LB2 322 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 DESI2Q9BSY9 194 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 ACE2Q9BYF1 805 aaPredicted RBP12.67□□□□□ -0.38
CHPF2-202ENST00000465601 PRDM16Q9HAZ2 1276 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 PCDH18Q9HCL0 1135 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 KLHL11Q9NVR0 708 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 SALL4Q9UJQ4 1053 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 ACTL7AQ9Y615 435 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 DUSP10Q9Y6W6 482 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
CHPF2-202ENST00000465601 PLXND1Q9Y4D7 1925 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 A0A0A6YYK5 440 aaPredicted RBP12.66□□□□□ -0.38
CHPF2-202ENST00000465601 EDDM13A0A1B0GTR0 161 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 RASA4BC9J798 803 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 K7ERQ8 282 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 RASA4O43374 803 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 SMAD6O43541 496 aaKnown RBP12.66□□□□□ -0.38
CHPF2-202ENST00000465601 ATP9BO43861 1147 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 BUB1BO60566 1050 aaPredicted RBP12.66□□□□□ -0.38
CHPF2-202ENST00000465601 RPP40O75818 363 aaKnown RBP12.66□□□□□ -0.38
CHPF2-202ENST00000465601 KRT7P08729 469 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 CD48P09326 243 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 SRCP12931 536 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 TNNT1P13805 278 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 COMTP21964 271 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 ETFBP38117 255 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 VASPP50552 380 aaPredicted RBP12.66□□□□□ -0.38
CHPF2-202ENST00000465601 ARSEP51690 589 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 ZNF135P52742 658 aaPredicted RBP12.66□□□□□ -0.38
CHPF2-202ENST00000465601 YBEYP58557 167 aaPredicted RBP12.66□□□□□ -0.38
CHPF2-202ENST00000465601 MMRN1Q13201 1228 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 DPYSQ14117 519 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 SIM2Q14190 667 aaPredicted RBP12.66□□□□□ -0.38
CHPF2-202ENST00000465601 LPAL2Q16609 132 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 ZFYVE27Q5T4F4 411 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 C9orf64Q5T6V5 341 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 RETSATQ6NUM9 610 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 LEKR1Q6ZMV7 388 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 PRR23BQ6ZRT6 265 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 CEP68Q76N32 757 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 KIAA1328Q86T90 577 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 CACUL1Q86Y37 369 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 UMODL1-AS1Q8N2C9 162 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 SH2D3CQ8N5H7 860 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 FRMD1Q8N878 549 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 ATP11CQ8NB49 1132 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 KCTD6Q8NC69 237 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 FRS2Q8WU20 508 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 SIPA1Q96FS4 1042 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 HMCESQ96FZ2 354 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 CSPG4P5Q96PW8 444 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 LACRTQ9GZZ8 138 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 KLC2Q9H0B6 622 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 GOLPH3Q9H4A6 298 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 HS3ST2Q9Y278 367 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 MFHAS1Q9Y4C4 1052 aa12.66□□□□□ -0.38
CHPF2-202ENST00000465601 NYNRINQ9P2P1 1898 aaKnown RBP12.65□□□□□ -0.38
CHPF2-202ENST00000465601 A0A0U1RQJ8 604 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 TARSL2A2RTX5 802 aaKnown RBP12.65□□□□□ -0.38
CHPF2-202ENST00000465601 PROB1E7EW31 1015 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 BUB1O43683 1085 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 KDELR3O43731 214 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 BNIP3LO60238 219 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 IL4RP24394 825 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 SLC1A1P43005 524 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 MRE11P49959 708 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 VAV2P52735 878 aa12.65□□□□□ -0.38
CHPF2-202ENST00000465601 HADHBP55084 474 aaKnown RBP12.65□□□□□ -0.38
CHPF2-202ENST00000465601 NAP1L1P55209 391 aaKnown RBP12.65□□□□□ -0.38
CHPF2-202ENST00000465601 ARF5P84085 180 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms