RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 EPC1Q9H2F5 836 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 MTG2Q9H4K7 406 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 LRRC19Q9H756 370 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 DONSONQ9NYP3 566 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 RCOR3Q9P2K3 495 aaPredicted RBP20.8■□□□□ 0.92
SKA3-205ENST00000465471 SALL4Q9UJQ4 1053 aa20.8■□□□□ 0.92
SKA3-205ENST00000465471 EDDM13A0A1B0GTR0 161 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 TARSL2A2RTX5 802 aaKnown RBP20.79■□□□□ 0.92
SKA3-205ENST00000465471 TMEM110-MUSTN1A8MSY1 372 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 H3BRJ5 948 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 BUB1BO60566 1050 aaPredicted RBP20.79■□□□□ 0.92
SKA3-205ENST00000465471 CD160O95971 181 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 MT-CO1P00395 513 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 KRT7P08729 469 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 SRCP12931 536 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 IL4RP24394 825 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 SLC1A1P43005 524 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 POLD3Q15054 466 aaPredicted RBP20.79■□□□□ 0.92
SKA3-205ENST00000465471 PARP15Q460N3 678 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 ATP13A4Q4VNC1 1196 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 C9orf64Q5T6V5 341 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 METTL3Q86U44 580 aaKnown RBP20.79■□□□□ 0.92
SKA3-205ENST00000465471 OR2T3Q8NH03 318 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 PTPRN2Q92932 1015 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 ERLEC1Q96DZ1 483 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 SLC6A17Q9H1V8 727 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 SEMA4AQ9H3S1 761 aa20.79■□□□□ 0.92
SKA3-205ENST00000465471 BCCIPQ9P287 314 aaKnown RBP eCLIP20.79■□□□□ 0.92
SKA3-205ENST00000465471 DCLK1O15075 740 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 SIN3BO75182 1162 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 NNMTP40261 264 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 ARL4AP40617 200 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 P2RY2P41231 377 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 SSR1P43307 286 aaKnown RBP20.78■□□□□ 0.92
SKA3-205ENST00000465471 MRE11P49959 708 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 CLCN6P51797 869 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 NDST2P52849 883 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 CDH6P55285 790 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 SRSF5Q13243 272 aaKnown RBP20.78■□□□□ 0.92
SKA3-205ENST00000465471 MAP7D1Q3KQU3 841 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 LRRC38Q5VT99 294 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 C11orf63Q6NUN7 778 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 TMPRSS6Q8IU80 811 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 ARHGAP12Q8IWW6 846 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 NPWQ8N729 165 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 CCDC112Q8NEF3 446 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 DESI2Q9BSY9 194 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 SPON2Q9BUD6 331 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 RSPH9Q9H1X1 276 aaPredicted RBP20.78■□□□□ 0.92
SKA3-205ENST00000465471 NUP205Q92621 2012 aa20.78■□□□□ 0.92
SKA3-205ENST00000465471 SPAG17Q6Q759 2223 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 RASA4BC9J798 803 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 CBX4O00257 560 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 RASA4O43374 803 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 KDELR3O43731 214 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 RPP40O75818 363 aaKnown RBP20.77■□□□□ 0.92
SKA3-205ENST00000465471 CD48P09326 243 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 COMTP21964 271 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 NOP2P46087 812 aaKnown RBP20.77■□□□□ 0.92
SKA3-205ENST00000465471 SERPINH1P50454 418 aaKnown RBP20.77■□□□□ 0.92
SKA3-205ENST00000465471 SLC20A2Q08357 652 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 SERINC3Q13530 473 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 DPYSL3Q14195 570 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 PDK2Q15119 407 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 DLG2Q15700 870 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 IL31Q6EBC2 164 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 RETSATQ6NUM9 610 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 LINGO4Q6UY18 593 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 LRRC8AQ8IWT6 810 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 SUMF1Q8NBK3 374 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 TPCN2Q8NHX9 752 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 FAF2Q96CS3 445 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 HMCESQ96FZ2 354 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 CALR3Q96L12 384 aaKnown RBP20.77■□□□□ 0.92
SKA3-205ENST00000465471 ZNF670Q9BS34 389 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 PRDM16Q9HAZ2 1276 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 USP36Q9P275 1121 aaKnown RBP20.77■□□□□ 0.92
SKA3-205ENST00000465471 DUSP10Q9Y6W6 482 aa20.77■□□□□ 0.92
SKA3-205ENST00000465471 K7ERQ8 282 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 ARHGAP6O43182 974 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 DAPK3O43293 454 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 SMAD6O43541 496 aaKnown RBP20.76■□□□□ 0.91
SKA3-205ENST00000465471 ZNF821O75541 412 aaPredicted RBP20.76■□□□□ 0.91
SKA3-205ENST00000465471 VAV1P15498 845 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 GJC1P36383 396 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 KRT81Q14533 505 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 USP39Q53GS9 565 aaKnown RBP20.76■□□□□ 0.91
SKA3-205ENST00000465471 FAM129BQ96TA1 746 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 ETNK2Q9NVF9 386 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 ALG6Q9Y672 507 aa20.76■□□□□ 0.91
SKA3-205ENST00000465471 ZSCAN5CA6NGD5 496 aaPredicted RBP20.75■□□□□ 0.91
SKA3-205ENST00000465471 ZNF487B1APH4 448 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 ZBTB24O43167 697 aaPredicted RBP20.75■□□□□ 0.91
SKA3-205ENST00000465471 IGLV3-19P01714 112 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 AMPD1P23109 780 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 GEMIN4P57678 1058 aaKnown RBP20.75■□□□□ 0.91
SKA3-205ENST00000465471 RPS14P62263 151 aaKnown RBP20.75■□□□□ 0.91
SKA3-205ENST00000465471 CCZ1BP86790 482 aa20.75■□□□□ 0.91
SKA3-205ENST00000465471 CCZ1P86791 482 aaPredicted RBP20.75■□□□□ 0.91
SKA3-205ENST00000465471 MMRN1Q13201 1228 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms