RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	CASC1	Q6TDU7	716 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	WDR53	Q7Z5U6	358 aa	Predicted RBP	5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	P3H2	Q8IVL5	708 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	RP9	Q8TA86	221 aa	Known RBP	5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CAGE1	Q8TC20	777 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	FAM71B	Q8TC56	605 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CCT6B	Q92526	530 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SLC9A6	Q92581	669 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	VPS50	Q96JG6	964 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	RMDN3	Q96TC7	470 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	KRTAP9-3	Q9BYQ3	159 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PCED1A	Q9H1Q7	454 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	IKZF4	Q9H2S9	585 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	MYH16	Q9H6N6	1097 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CPNE5	Q9HCH3	593 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	FSCN3	Q9NQT6	498 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ASB6	Q9NWX5	421 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	AMFR	Q9UKV5	643 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ADAMTS5	Q9UNA0	930 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	IGSF10	Q6WRI0	2623 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	EVC2	Q86UK5	1308 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	OTOGL	Q3ZCN5	2332 aa		5.63	□□□□□ -1.51
CACNA1C-223	ENST00000465278	LOC102724159	A0A0B4J2E5	919 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	OR2W5	A6NFC9	320 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PCDH17	O14917	1159 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	KIAA0355	O15063	1070 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	EXOC3	O60645	756 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	FGA	P02671	866 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SLPI	P03973	132 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PROS1	P07225	676 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	NPS	P0C0P6	89 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ITPKB	P27987	946 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SLC5A2	P31639	672 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SUMO2	P61956	95 aa	Known RBP	5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	IRX3	P78415	501 aa	Predicted RBP	5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SLC20A2	Q08357	652 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	DHX8	Q14562	1220 aa	Known RBP	5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PWP2	Q15269	919 aa	Known RBP	5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CCDC184	Q52MB2	194 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SOWAHC	Q53LP3	525 aa	Predicted RBP	5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	GORAB	Q5T7V8	394 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	RINT1	Q6NUQ1	792 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ANKRD16	Q6P6B7	361 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ANKRD42	Q8N9B4	389 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	MCRS1	Q96EZ8	462 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PAGR1	Q9BTK6	254 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ZCWPW1	Q9H0M4	648 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	MAGEH1	Q9H213	219 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PDCL3	Q9H2J4	239 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	USP29	Q9HBJ7	922 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	HELLS	Q9NRZ9	838 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	VPS4A	Q9UN37	437 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PCDHB7	Q9Y5E2	793 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	DMRT1	Q9Y5R6	373 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ABCC12	Q96J65	1359 aa		5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	EDC4	Q6P2E9	1401 aa	Known RBP	5.62	□□□□□ -1.51
CACNA1C-223	ENST00000465278	FBN2	P35556	2912 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ACKR2	O00590	384 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SUV39H1	O43463	412 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CBFA2T3	O75081	653 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	RHOBTB3	O94955	611 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	COL11A1	P12107	1806 aa	Predicted RBP	5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	TYRP1	P17643	537 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	AVPR2	P30518	371 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	AKT1	P31749	480 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	COPB1	P53618	953 aa	Known RBP	5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ALDH18A1	P54886	795 aa	Known RBP	5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	INHBC	P55103	352 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CYP4F2	P78329	520 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	TIGD6	Q17RP2	521 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	ERCC6L	Q2NKX8	1250 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	LEXM	Q3ZCV2	418 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SULT6B1	Q6IMI4	303 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CCDC129	Q6ZRS4	1044 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	FAM43B	Q6ZT52	329 aa	Predicted RBP	5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PTCHD4	Q6ZW05	846 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	TTC30A	Q86WT1	665 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CCDC117	Q8IWD4	279 aa	Predicted RBP	5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CACNA2D3	Q8IZS8	1091 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	AMER2	Q8N7J2	671 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SIMC1	Q8NDZ2	872 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PNISR	Q8TF01	805 aa	Known RBP	5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	OPTN	Q96CV9	577 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	WDR24	Q96S15	920 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	HERPUD2	Q9BSE4	406 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	DUSP26	Q9BV47	211 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	FSD1L	Q9BXM9	530 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SYNPO2L	Q9H987	977 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	SAP30L	Q9HAJ7	183 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	MLXIP	Q9HAP2	919 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	TMEM8A	Q9HCN3	771 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	MYOZ2	Q9NPC6	264 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	TLK1	Q9UKI8	766 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CA14	Q9ULX7	337 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PCDHB2	Q9Y5E7	798 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	PCDHGB3	Q9Y5G1	929 aa		5.61	□□□□□ -1.51
CACNA1C-223	ENST00000465278	CYR61	O00622	381 aa		5.6	□□□□□ -1.51
CACNA1C-223	ENST00000465278	TCERG1	O14776	1098 aa	Known RBP	5.6	□□□□□ -1.51
CACNA1C-223	ENST00000465278	AKAP8	O43823	692 aa	Known RBP	5.6	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms