RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 SPINK2P20155 84 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 SDC4P31431 198 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 DRD3P35462 400 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 NSFP46459 744 aaKnown RBP26.53■■□□□ 1.84
U2AF1-206ENST00000464750 METAP1P53582 386 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 C15orf59Q2T9L4 293 aaPredicted RBP26.53■■□□□ 1.84
U2AF1-206ENST00000464750 KIF19Q2TAC6 998 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 C6orf118Q5T5N4 469 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 DCAF4L2Q8NA75 395 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 OR14C36Q8NHC7 312 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 JOSD2Q8TAC2 188 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 RXFP2Q8WXD0 754 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 TM7SF3Q9NS93 570 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 VPS51Q9UID3 782 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 HS3ST2Q9Y278 367 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 ANKRD6Q9Y2G4 727 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 SNX11Q9Y5W9 270 aa26.53■■□□□ 1.84
U2AF1-206ENST00000464750 SRGAP2O75044 1071 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 ENDOD1O94919 500 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 SRCP12931 536 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 PTP4A2Q12974 167 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 CLEC16AQ2KHT3 1053 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 RAB6CQ53S08 254 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 ARTNQ5T4W7 220 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 ADAT2Q7Z6V5 191 aaKnown RBP26.52■■□□□ 1.84
U2AF1-206ENST00000464750 SLC6A18Q96N87 628 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 RAB6CQ9H0N0 254 aa26.52■■□□□ 1.84
U2AF1-206ENST00000464750 SEPT11Q9NVA2 429 aaKnown RBP26.52■■□□□ 1.84
U2AF1-206ENST00000464750 A0A0D9SEW6 157 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 C2CD4BA6NLJ0 364 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 C1QTNF3-AMACRE9PGA6 284 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 ALOX15BO15296 676 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 BNIP3LO60238 219 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 OR1E1P30953 314 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 CCDC14Q49A88 953 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 ANO6Q4KMQ2 910 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 FAM46CQ5VWP2 391 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP26.51■■□□□ 1.83
U2AF1-206ENST00000464750 ATP11CQ8NB49 1132 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 ZYG11BQ9C0D3 744 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 NAT10Q9H0A0 1025 aaKnown RBP26.51■■□□□ 1.83
U2AF1-206ENST00000464750 ADAM22Q9P0K1 906 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 SARDHQ9UL12 918 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 PCDHB9Q9Y5E1 797 aa26.51■■□□□ 1.83
U2AF1-206ENST00000464750 C10orf142B7Z368 130 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 PLK4O00444 970 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 MCF2LO15068 1137 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 MT-CO1P00395 513 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 CCR5P51681 352 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 GSCP56915 257 aaPredicted RBP26.5■■□□□ 1.83
U2AF1-206ENST00000464750 RACK1P63244 317 aaKnown RBP26.5■■□□□ 1.83
U2AF1-206ENST00000464750 PHF13Q86YI8 300 aaPredicted RBP26.5■■□□□ 1.83
U2AF1-206ENST00000464750 OR7D4Q8NG98 312 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 PIP4K2CQ8TBX8 421 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 FAM131CQ96AQ9 280 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 SCNM1Q9BWG6 230 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 EBF2Q9HAK2 575 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 ZNF212Q9UDV6 495 aa26.5■■□□□ 1.83
U2AF1-206ENST00000464750 CALB1P05937 261 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 RRM1P23921 792 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 PTPN9P43378 593 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 PPP2CBP62714 309 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 PPP2CAP67775 309 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 TRIP6Q15654 476 aaKnown RBP26.49■■□□□ 1.83
U2AF1-206ENST00000464750 ST3GAL2Q16842 350 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 ARL13BQ3SXY8 428 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 POM121L1PQ3SYA9 428 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 LINGO4Q6UY18 593 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 STRADAQ7RTN6 431 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 SETD7Q8WTS6 366 aaKnown RBP26.49■■□□□ 1.83
U2AF1-206ENST00000464750 SELENOOQ9BVL4 669 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 ACE2Q9BYF1 805 aaPredicted RBP26.49■■□□□ 1.83
U2AF1-206ENST00000464750 PCOLCE2Q9UKZ9 415 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 PPM1HQ9ULR3 514 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 CHD5Q8TDI0 1954 aa26.49■■□□□ 1.83
U2AF1-206ENST00000464750 USP24Q9UPU5 2620 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 ILVBLA1L0T0 632 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 K7ERQ8 282 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 SLC7A4O43246 635 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 HYAL3O43820 417 aaPredicted RBP26.48■■□□□ 1.83
U2AF1-206ENST00000464750 RTN2O75298 545 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 KRT3P12035 628 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 GLDCP23378 1020 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 CTSKP43235 329 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 KCNT1Q5JUK3 1230 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 ZNF783Q6ZMS7 281 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 CCDC114Q96M63 670 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 AGPAT1Q99943 283 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 AASDHPPTQ9NRN7 309 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 PPARGC1AQ9UBK2 798 aaKnown RBP26.48■■□□□ 1.83
U2AF1-206ENST00000464750 TPX2Q9ULW0 747 aaKnown RBP26.48■■□□□ 1.83
U2AF1-206ENST00000464750 PCDHGB2Q9Y5G2 931 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 DOCK9Q9BZ29 2069 aa26.48■■□□□ 1.83
U2AF1-206ENST00000464750 KMT2BQ9UMN6 2715 aaPredicted RBP26.47■■□□□ 1.83
U2AF1-206ENST00000464750 TBC1D3DA0A087WVF3 549 aa26.47■■□□□ 1.83
U2AF1-206ENST00000464750 TBC1D3IA0A087WXS9 549 aa26.47■■□□□ 1.83
U2AF1-206ENST00000464750 TBC1D3EA0A087X179 549 aa26.47■■□□□ 1.83
U2AF1-206ENST00000464750 TBC1D3KA0A087X1G2 549 aa26.47■■□□□ 1.83
U2AF1-206ENST00000464750 TBC1D3FA6NER0 549 aaPredicted RBP26.47■■□□□ 1.83
U2AF1-206ENST00000464750 TBC1D3LB9A6J9 549 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms