RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 GDF15Q99988 308 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 FAM213AQ9BRX8 229 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 PARVBQ9HBI1 364 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 MAGEE1Q9HCI5 957 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 ARHGAP28Q9P2N2 729 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 ZNF70Q9UC06 446 aaPredicted RBP11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 VTI1BQ9UEU0 232 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 MID2Q9UJV3 735 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 PRR12Q9ULL5 1215 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 COL6A3P12111 3177 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 H7C0C1 242 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 AQP9O43315 295 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 AKAP10O43572 662 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 PABPC1P11940 636 aaKnown RBP11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 KRT3P12035 628 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 BMP2P12643 396 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 JAK1P23458 1154 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 IL1R2P27930 398 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 CTGFP29279 349 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 SERPINB5P36952 375 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 GARSP41250 739 aaKnown RBP11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 ATP5OP48047 213 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 NME5P56597 212 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 TRIM16LQ309B1 348 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 SCARA3Q6AZY7 606 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 SPOPLQ6IQ16 392 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 OGFOD2Q6N063 350 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 LINC00299Q6ZSB3 139 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 ZBTB49Q6ZSB9 765 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 CYP2U1Q7Z449 544 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 MCF2L2Q86YR7 1114 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 ARFGAP1Q8N6T3 406 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 TEPSINQ96N21 525 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 MROQ9BYG7 248 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 ILKAPQ9H0C8 392 aaPredicted RBP11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 TRPV6Q9H1D0 765 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 GBA3Q9H227 469 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 ZNF385DQ9H6B1 395 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 TUT1Q9H6E5 874 aaKnown RBP11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 VRTNQ9H8Y1 702 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 APOBEC3GQ9HC16 384 aaKnown RBP11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 CD320Q9NPF0 282 aa11.74□□□□□ -0.53
TNRC6A-205ENST00000464539 TPP1O14773 563 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 HDAC3O15379 428 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 CFLARO15519 480 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 PAPSS1O43252 624 aaPredicted RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 TRUB2O95900 331 aaKnown RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 LDHAP00338 332 aaKnown RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 ALDOAP04075 364 aaKnown RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 PRKCGP05129 697 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 ENO3P13929 434 aaPredicted RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 TGM2P21980 687 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 GABRB3P28472 473 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 RFC1P35251 1148 aaPredicted RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 ATP1A4Q13733 1029 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 OXA1LQ15070 435 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 INTS11Q5TA45 600 aaKnown RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 MYO1HQ8N1T3 1032 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 FAM47BQ8NA70 645 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 TDRD5Q8NAT2 981 aaKnown RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 GRIN3AQ8TCU5 1115 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 PBXIP1Q96AQ6 731 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 RCN3Q96D15 328 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 CTRCQ99895 268 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 UNC93B1Q9H1C4 597 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 XPNPEP3Q9NQH7 507 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 ANLNQ9NQW6 1124 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 MAN1C1Q9NR34 630 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 DUS2Q9NX74 493 aaKnown RBP11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 CPA4Q9UI42 421 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 CCPG1Q9ULG6 757 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 CDC14AQ9UNH5 594 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 A0A0C4DFX4 3053 aa11.73□□□□□ -0.53
TNRC6A-205ENST00000464539 TCRBV3S1A0A5B6 114 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 WDR64B1ANS9 1081 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 LSM1O15116 133 aaKnown RBP11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 DHX15O43143 795 aaKnown RBP11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 STAMBPO95630 424 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 ERBB2P04626 1255 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 MLNP12872 115 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 P4HA1P13674 534 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 PTPN1P18031 435 aaKnown RBP11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 NFKBIAP25963 317 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 ARRB2P32121 409 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 GSSP48637 474 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 AP3M2P53677 418 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 CDH15P55291 814 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 PKNOX1P55347 436 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 CTBSQ01459 385 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 NIPAL4Q0D2K0 466 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 TUBA3CQ13748 450 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 SMTNL2Q2TAL5 461 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 TRMT10BQ6PF06 316 aaKnown RBP11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 HHIPL2Q6UWX4 724 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 XKR5Q6UX68 686 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 DNAJC14Q6Y2X3 702 aaPredicted RBP11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 ATG14Q6ZNE5 492 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 GADL1Q6ZQY3 521 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 CAMK1DQ8IU85 385 aa11.72□□□□□ -0.53
TNRC6A-205ENST00000464539 LRTOMTQ8WZ04 291 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms