RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 BRDTQ58F21 947 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CAVIN4Q5BKX8 364 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SLC9A4Q6AI14 798 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 UGT3A1Q6NUS8 523 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CCDC137Q6PK04 289 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 FKBP9P1Q75LS8 142 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 EEPD1Q7L9B9 569 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CDH24Q86UP0 819 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 HPS6Q86YV9 775 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 HID1Q8IV36 788 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SIX6OS1Q8N1H7 587 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF786Q8N393 782 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PI4KAP1Q8N8J0 262 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TERB1Q8NA31 727 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM35BQ8NCS4 154 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 OR8K3Q8NH51 312 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 NEDD1Q8NHV4 660 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CDKL2Q92772 493 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM63Q969Q1 353 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZUFSPQ96AP4 578 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CEP95Q96GE4 821 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 VCPIP1Q96JH7 1222 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF560Q96MR9 790 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ERGIC2Q96RQ1 377 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 KLF6Q99612 283 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 IL12RB2Q99665 862 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 C17orf62Q9BQA9 187 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SEC22CQ9BRL7 303 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 METTL22Q9BUU2 404 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 LSM14BQ9BX40 385 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TSSK1BQ9BXA7 367 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 DCLK3Q9C098 648 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ABCG4Q9H172 646 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 C17orf75Q9HAS0 396 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 XPNPEP1Q9NQW7 623 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CHST12Q9NRB3 414 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZSWIM5Q9P217 1185 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 GMEB2Q9UKD1 530 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 AMFRQ9UKV5 643 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RAB26Q9ULW5 256 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MYRFQ9Y2G1 1151 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CACNA1FO60840 1977 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RALGAPA2Q2PPJ7 1873 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TNKSO95271 1327 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 EXOC1LA0A1B0GW35 172 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SSU72P8A0A1W2PR75 194 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FADS2P1A8MWK0 482 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 B4E1Z4 1266 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 CES2O00748 559 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 IRS4O14654 1257 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SLC9A3R1O14745 358 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MAGEB2O15479 319 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ZBTB43O43298 467 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PDE8AO60658 829 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PTCD1O75127 700 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 NDUFS6O75380 124 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PIAS1O75925 651 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 H6PDO95479 791 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 CFBP00751 764 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PRKCBP05771 671 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 INHBBP09529 407 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MUTP22033 750 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FGFR3P22607 806 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 CBLP22681 906 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PKLRP30613 574 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 UQCRC1P31930 480 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 HNRNPH3P31942 346 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MSX2P35548 267 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 NT5C2P49902 561 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 AKR1D1P51857 326 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ARHGDIBP52566 201 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SLC12A2P55011 1212 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ANTXR2P58335 489 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 DLG4P78352 724 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MRPS22P82650 360 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 OCA2Q04671 838 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 DHX34Q14147 1143 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ASIC2Q16515 512 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 FIGNQ5HY92 759 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 METTL11BQ5VVY1 283 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PGM2L1Q6PCE3 622 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 DCUN1D2Q6PH85 259 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 PLEKHM3Q6ZWE6 761 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TRMT10CQ7L0Y3 403 aaKnown RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ADGRG6Q86SQ4 1221 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TLK2Q86UE8 772 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 HERC6Q8IVU3 1022 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 CCDC103Q8IW40 242 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 GALNT12Q8IXK2 581 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 ADGRG5Q8IZF4 528 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 RAET1EQ8TD07 263 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 SLC44A1Q8WWI5 657 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TANKQ92844 425 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 P2RX5Q93086 422 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 C7orf26Q96N11 449 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TTC25Q96NG3 672 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 TTYH2Q9BSA4 534 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 GCOM2Q9BZD3 368 aaPredicted RBP3.67□□□□□ -1.82
COL8A1-205ENST00000463753 OR2B2Q9GZK3 357 aa3.67□□□□□ -1.82
COL8A1-205ENST00000463753 MIR1-1HGQ9H1L0 117 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms