RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TGM1P22735 817 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 MPLP40238 635 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 HCAR3P49019 387 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 ZNF75DP51815 510 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 GALCP54803 685 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 YBEYP58557 167 aaPredicted RBP13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 RPL6Q02878 288 aaKnown RBP13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 BOLA3Q53S33 107 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 LYSMD4Q5XG99 296 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 H2AFVQ71UI9 128 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 CCDC42Q96M95 316 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 NUP85Q9BW27 656 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 SGK2Q9HBY8 427 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 SEMA4GQ9NTN9 838 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 SLCO3A1Q9UIG8 710 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 INTUQ9ULD6 942 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 INVSQ9Y283 1065 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 CEP192Q8TEP8 1941 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 RALGAPA1Q6GYQ0 2036 aa13.38□□□□□ -0.27
R3HDM1-213ENST00000463230 FAM72CH0Y354 149 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 LRCH4O75427 683 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 TMEM253P0C7T8 217 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 EPHB2P29323 1055 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 MIPP30301 263 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 DHPSP49366 369 aaPredicted RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 FAM72AQ5TYM5 149 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 FAM72DQ6L9T8 149 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 FAM72BQ86X60 149 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ARFGAP1Q8N6T3 406 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 TEKT4Q8WW24 435 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 OR8D1Q8WZ84 308 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 PTPRN2Q92932 1015 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ZNF419Q96HQ0 510 aaPredicted RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ARRDC1-AS1Q9H2J1 176 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ATP13A1Q9HD20 1204 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 EVLQ9UI08 416 aaPredicted RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 FZD4Q9ULV1 537 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 NCKAP1Q9Y2A7 1128 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 NUP205Q92621 2012 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 GVINP1Q7Z2Y8 2422 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 RAMP2O60895 175 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ZMPSTE24O75844 475 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 C5AR1P21730 350 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 STK19P49842 368 aaPredicted RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 TPI1P60174 286 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 GFPT1Q06210 699 aaPredicted RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 SPEM2Q0P670 501 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 CST6Q15828 149 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 PARP15Q460N3 678 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 FAM46CQ5VWP2 391 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 SYT12Q8IV01 421 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 PLPP6Q8IY26 295 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 UMODL1-AS1Q8N2C9 162 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 DCLK2Q8N568 766 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ZNF366Q8N895 744 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 CEP76Q8TAP6 659 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 CASKIN2Q8WXE0 1202 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ARHGEF2Q92974 986 aaKnown RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ISG20Q96AZ6 181 aaKnown RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 RPL10LQ96L21 214 aaKnown RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 SNRNP25Q9BV90 132 aaKnown RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 SLC6A17Q9H1V8 727 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 NHEJ1Q9H9Q4 299 aaPredicted RBP13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 PARD6AQ9NPB6 346 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 ANAPC7Q9UJX3 599 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 USP18Q9UMW8 372 aa13.37□□□□□ -0.27
R3HDM1-213ENST00000463230 A0A0D9SEW6 157 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 MYO1FO00160 1098 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 SRCP12931 536 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 ADKP55263 362 aaKnown RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 DLG2Q15700 870 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 WDR45BQ5MNZ6 344 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 SYCP2LQ5T4T6 812 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 PRR23CQ6ZRP0 262 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 DNAAF5Q86Y56 855 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 PCDH20Q8N6Y1 951 aaKnown RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 OR7D4Q8NG98 312 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 TOE1Q96GM8 510 aaKnown RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 FAM129BQ96TA1 746 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 TRIM7Q9C029 511 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 SUSD2Q9UGT4 822 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 C1QTNF3-AMACRE9PGA6 284 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 MCF2LO15068 1137 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 SLC7A4O43246 635 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 SNAP91O60641 907 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 MAN1A1P33908 653 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 SERPINH1P50454 418 aaKnown RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 NDST2P52849 883 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 CREB5Q02930 508 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 POLD3Q15054 466 aaPredicted RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 CYP4V2Q6ZWL3 525 aaPredicted RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 ABCA7Q8IZY2 2146 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 PYROXD2Q8N2H3 581 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 ATP11CQ8NB49 1132 aa13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 ZNF564Q8TBZ8 553 aaPredicted RBP13.36□□□□□ -0.27
R3HDM1-213ENST00000463230 ARHGEF26Q96DR7 871 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms