RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 TBC1D3HP0C7X1 549 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 UNGP13051 313 aaPredicted RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 OR1E1P30953 314 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ADRA1BP35368 520 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 KLK7P49862 253 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 IRAK1P51617 712 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CLCN6P51797 869 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 FAM193AP78312 1265 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 NRG1Q02297 640 aaPredicted RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CENPCQ03188 943 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SYCP1Q15431 976 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ST3GAL2Q16842 350 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 KIF19Q2TAC6 998 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ARL13BQ3SXY8 428 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ALFQ53S48 1182 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 C2CD6Q53TS8 623 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 C6orf118Q5T5N4 469 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3GQ6DHY5 549 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3CQ6IPX1 549 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 STRADAQ7RTN6 431 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ADAT2Q7Z6V5 191 aaKnown RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 PRPF39Q86UA1 669 aaKnown RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 NAXDQ8IW45 347 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3Q8IZP1 549 aaPredicted RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 AADATQ8N5Z0 425 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ATP11CQ8NB49 1132 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TMIEQ8NEW7 156 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 OR52K2Q8NGK3 314 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 OR14C36Q8NHC7 312 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 RHBDD1Q8TEB9 315 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SETD7Q8WTS6 366 aaKnown RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SLC20A1Q8WUM9 679 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 RXFP2Q8WXD0 754 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CENPIQ92674 756 aaPredicted RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 FAM131CQ96AQ9 280 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CCDC114Q96M63 670 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CFAP57Q96MR6 1250 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CAMK1GQ96NX5 476 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CDC6Q99741 560 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SCNM1Q9BWG6 230 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ACE2Q9BYF1 805 aaPredicted RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ZYG11BQ9C0D3 744 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 NAT10Q9H0A0 1025 aaKnown RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 OSBPL2Q9H1P3 480 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 IL21RQ9HBE5 538 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ADAM22Q9P0K1 906 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SERGEFQ9UGK8 458 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 PCOLCE2Q9UKZ9 415 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 APOBEC2Q9Y235 224 aaKnown RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 MSRB2Q9Y3D2 182 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 NEUROG3Q9Y4Z2 214 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SNX11Q9Y5W9 270 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 AKAP13Q12802 2813 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 ACACAQ13085 2346 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SPEGQ15772 3267 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 PLXNA2O75051 1894 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 NYNRINQ9P2P1 1898 aaKnown RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 PLXNB3Q9ULL4 1909 aa7.46□□□□□ -1.21
PTPRF-210ENST00000463041 PTPRBP23467 1997 aa7.46□□□□□ -1.21
PTPRF-210ENST00000463041 TP53BP1Q12888 1972 aaPredicted RBP7.46□□□□□ -1.21
PTPRF-210ENST00000463041 USP24Q9UPU5 2620 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 TMEM8BA6NDV4 472 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 C2CD4BA6NLJ0 364 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 SIGLEC16A6NMB1 481 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 SMTNL1A8MU46 457 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 EPHB6O15197 1021 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 FLRT2O43155 660 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 LATO43561 262 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 PCDHGA12O60330 932 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 MAGEC1O60732 1142 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 MT-CO1P00395 513 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 CALB1P05937 261 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 KRT3P12035 628 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 SRCP12931 536 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 VAV1P15498 845 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 CD38P28907 300 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 SDC4P31431 198 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 CHRNA3P32297 505 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 DRD3P35462 400 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 ETFBP38117 255 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 GGCXP38435 758 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 CTSKP43235 329 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 PTPN9P43378 593 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 NSFP46459 744 aaKnown RBP7.46□□□□□ -1.22
PTPRF-210ENST00000463041 PSMD8P48556 350 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 ADPRHP54922 357 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 GSCP56915 257 aaPredicted RBP7.46□□□□□ -1.22
PTPRF-210ENST00000463041 C21orf59P57076 290 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 ATP11AP98196 1134 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 PTP4A2Q12974 167 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 NCAPHQ15003 741 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 CLEC16AQ2KHT3 1053 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 CCDC14Q49A88 953 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 SLC45A4Q5BKX6 768 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 ARTNQ5T4W7 220 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 TRNP1Q6NT89 227 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 RETSATQ6NUM9 610 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 NEK5Q6P3R8 708 aa7.46□□□□□ -1.22
PTPRF-210ENST00000463041 RAB44Q7Z6P3 723 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms