RNA–Protein interactions for RNA: ENST00000462944.1

MDH1-209, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-209ENST00000462944 SMYD3Q9H7B4 428 aa9.5□□□□□ -0.89
MDH1-209ENST00000462944 TMEM8AQ9HCN3 771 aa9.5□□□□□ -0.89
MDH1-209ENST00000462944 GDF3Q9NR23 364 aa9.5□□□□□ -0.89
MDH1-209ENST00000462944 OLA1Q9NTK5 396 aaKnown RBP9.5□□□□□ -0.89
MDH1-209ENST00000462944 ADAMTS1Q9UHI8 967 aa9.5□□□□□ -0.89
MDH1-209ENST00000462944 NAGPAQ9UK23 515 aa9.5□□□□□ -0.89
MDH1-209ENST00000462944 A0A1W2PQH9 124 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 LRRC72A6NJI9 287 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 HHLA1C9JL84 531 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 CYP26A1O43174 497 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 RNASEH1O60930 286 aaKnown RBP9.49□□□□□ -0.89
MDH1-209ENST00000462944 BEST1O76090 585 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 FSBPO95073 299 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 ATP1A1P05023 1023 aaKnown RBP9.49□□□□□ -0.89
MDH1-209ENST00000462944 CCDC172P0C7W6 258 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 CKMT2P17540 419 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 CD38P28907 300 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 CORO1AP31146 461 aaKnown RBP9.49□□□□□ -0.89
MDH1-209ENST00000462944 RXRGP48443 463 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 MXI1P50539 228 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
MDH1-209ENST00000462944 DLG4P78352 724 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 CETN1Q12798 172 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 BIRC3Q13489 604 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 NCOA4Q13772 614 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 FNDC3BQ53EP0 1204 aaKnown RBP9.49□□□□□ -0.89
MDH1-209ENST00000462944 MARCH9Q86YJ5 346 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 SPACA3Q8IXA5 215 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 TTC39CQ8N584 583 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.49□□□□□ -0.89
MDH1-209ENST00000462944 RDH13Q8NBN7 331 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 SAP25Q8TEE9 199 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 SNRNP27Q8WVK2 155 aaKnown RBP9.49□□□□□ -0.89
MDH1-209ENST00000462944 UBXN4Q92575 508 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 ERLEC1Q96DZ1 483 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 FAM81BQ96LP2 452 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 OSER1Q9NX31 292 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 SALL4Q9UJQ4 1053 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 DNAJC12Q9UKB3 198 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 RAB21Q9UL25 225 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 FZD4Q9ULV1 537 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 SNX12Q9UMY4 172 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 TFR2Q9UP52 801 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 CLCA2Q9UQC9 943 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 SAR1BQ9Y6B6 198 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 USP3Q9Y6I4 520 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 CAPN6Q9Y6Q1 641 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 DUSP10Q9Y6W6 482 aa9.49□□□□□ -0.89
MDH1-209ENST00000462944 SMG1Q96Q15 3661 aaKnown RBP9.49□□□□□ -0.89
MDH1-209ENST00000462944 LRRIQ3A6PVS8 624 aaPredicted RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 B8ZZF3 427 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 DDX3XO00571 662 aaKnown RBP eCLIP9.48□□□□□ -0.893e-29■■■□□ 17.7
MDH1-209ENST00000462944 CES2O00748 559 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 BRINP1O60477 761 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 DXOO77932 396 aaKnown RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 CLSTN1O94985 981 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 KLKB1P03952 638 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 TUBBP07437 444 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 DLDP09622 509 aaKnown RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 CCDC130P13994 396 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 GLDCP23378 1020 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 ACP1P24666 158 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 EPHA8P29322 1005 aaPredicted RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 HARS2P49590 506 aaKnown RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 PGFP49763 221 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 CCR5P51681 352 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 NDST1P52848 882 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 HADHBP55084 474 aaKnown RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 ERVPABLB-1P60509 514 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 RPS14P62263 151 aaKnown RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 CXADRP78310 365 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 KCNC4Q03721 635 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 CKAP4Q07065 602 aaKnown RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 INCA1Q0VD86 236 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 OVGP1Q12889 678 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 DRAP1Q14919 205 aaPredicted RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 MPP7Q5T2T1 576 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 KRT39Q6A163 491 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 GJB7Q6PEY0 223 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 FBXO38Q6PIJ6 1188 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 KIAA0907Q7Z7F0 614 aaPredicted RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 VPS36Q86VN1 386 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 IQCHQ86VS3 1027 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 ERICH1Q86X53 443 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 DCBLD1Q8N8Z6 715 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 KDM1BQ8NB78 822 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 UBE2Q2Q8WVN8 375 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 ZNF516Q92618 1163 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 CYFIP2Q96F07 1278 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 FAXDC2Q96IV6 333 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 CALR3Q96L12 384 aaKnown RBP9.48□□□□□ -0.89
MDH1-209ENST00000462944 NOX5Q96PH1 765 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 ALS2CR12Q96Q35 445 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 LGMNQ99538 433 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 ORAI3Q9BRQ5 295 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 NT5C1AQ9BXI3 368 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 DPH1Q9BZG8 443 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 UBXN6Q9BZV1 441 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 IMPG2Q9BZV3 1241 aa9.48□□□□□ -0.89
MDH1-209ENST00000462944 CYP3A43Q9HB55 503 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms