RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ACBD5Q5T8D3 534 aaPredicted RBP15.8■□□□□ 0.12
SKA3-204ENST00000462482 Q6ZVU0 165 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 SLC26A9Q7LBE3 791 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 FAM114A1Q8IWE2 563 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 WDTC1Q8N5D0 677 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 SH2D3CQ8N5H7 860 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 ATP11CQ8NB49 1132 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 KLHDC7BQ96G42 594 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.8■□□□□ 0.12
SKA3-204ENST00000462482 KIAA1468Q9P260 1216 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 DNAJC12Q9UKB3 198 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 PPM1HQ9ULR3 514 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 AK5Q9Y6K8 562 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 ZFYVE26Q68DK2 2539 aa15.8■□□□□ 0.12
SKA3-204ENST00000462482 PLK4O00444 970 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 KPNA3O00505 521 aaPredicted RBP15.79■□□□□ 0.12
SKA3-204ENST00000462482 GADD45BO75293 160 aaPredicted RBP15.79■□□□□ 0.12
SKA3-204ENST00000462482 F9P00740 461 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 CKMT2P17540 419 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 PON1P27169 355 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 ACADVLP49748 655 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 RNASE9P60153 205 aaKnown RBP15.79■□□□□ 0.12
SKA3-204ENST00000462482 BNIP3Q12983 259 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 NEK5Q6P3R8 708 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 OLFML1Q6UWY5 402 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 LRRC69Q6ZNQ3 347 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 TMEM35BQ8NCS4 154 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 MSANTD4Q8NCY6 345 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 ZNF397Q8NF99 534 aaPredicted RBP15.79■□□□□ 0.12
SKA3-204ENST00000462482 DCBLD2Q96PD2 775 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 TKTL2Q9H0I9 626 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 SARDHQ9UL12 918 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 TBC1D30Q9Y2I9 924 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 ZZEF1O43149 2961 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 ASPMQ8IZT6 3477 aa15.79■□□□□ 0.12
SKA3-204ENST00000462482 C10orf142B7Z368 130 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 CBX4O00257 560 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 PRNPP04156 253 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 ERBB2P04626 1255 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 AKT2P31751 481 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 GGCXP38435 758 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 ABCG1P45844 678 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 SULT1E1P49888 294 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 METAP1P53582 386 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 DEUP1Q05D60 604 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 CAMK4Q16566 473 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 HES3Q5TGS1 186 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 AGBL4Q5VU57 503 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 SETD3Q86TU7 594 aaPredicted RBP15.78■□□□□ 0.12
SKA3-204ENST00000462482 MLKLQ8NB16 471 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 FAM131CQ96AQ9 280 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 ALG14Q96F25 216 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 PPP1R16AQ96I34 528 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 ARHGAP20Q9P2F6 1191 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 HS3ST2Q9Y278 367 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 ATRXP46100 2492 aa15.78■□□□□ 0.12
SKA3-204ENST00000462482 A0A087WV48 116 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 RRP8O43159 456 aaKnown RBP15.77■□□□□ 0.12
SKA3-204ENST00000462482 SRCP12931 536 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 CHRNA3P32297 505 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 CLCN6P51797 869 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 DAB2P98082 770 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 APBA1Q02410 837 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 TARDBPQ13148 414 aaKnown RBP eCLIP15.77■□□□□ 0.12
SKA3-204ENST00000462482 MAN2A1Q16706 1144 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 PTPN20Q4JDL3 420 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 SFMBT2Q5VUG0 894 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 C14orf80Q86SX3 495 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 SLC47A2Q86VL8 602 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 SPATS2Q86XZ4 545 aaKnown RBP15.77■□□□□ 0.12
SKA3-204ENST00000462482 TMIEQ8NEW7 156 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 PIGVQ9NUD9 493 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 OR51B4Q9Y5P0 310 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 GTF3C3Q9Y5Q9 886 aa15.77■□□□□ 0.12
SKA3-204ENST00000462482 A0A1W2PQU0 124 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 FOXN3O00409 490 aaPredicted RBP15.76■□□□□ 0.11
SKA3-204ENST00000462482 PES1O00541 588 aaKnown RBP15.76■□□□□ 0.11
SKA3-204ENST00000462482 SLC31A1O15431 190 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 SDC3O75056 442 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 PCDH8O95206 1070 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 ADCY5O95622 1261 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 THEGLP0DJG4 465 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 ALPPL2P10696 532 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 PRKCSHP14314 528 aaPredicted RBP15.76■□□□□ 0.11
SKA3-204ENST00000462482 CXCR3P49682 368 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 IRAK1P51617 712 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 UBE2HP62256 183 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 E2F1Q01094 437 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 SEMG2Q02383 582 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 RAPGEF1Q13905 1077 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 C5orf22Q49AR2 442 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 SOWAHCQ53LP3 525 aaPredicted RBP15.76■□□□□ 0.11
SKA3-204ENST00000462482 FAM102AQ5T9C2 384 aaPredicted RBP15.76■□□□□ 0.11
SKA3-204ENST00000462482 RETSATQ6NUM9 610 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 ERICH1Q86X53 443 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 DCAF4L2Q8NA75 395 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 OR52K2Q8NGK3 314 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 BAP1Q92560 729 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 TSC1Q92574 1164 aa15.76■□□□□ 0.11
SKA3-204ENST00000462482 C18orf8Q96DM3 657 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms