RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ATP5BP06576 529 aaKnown RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 PABPC1P11940 636 aaKnown RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 ARSAP15289 507 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 CES1P23141 567 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 HSPA9P38646 679 aaKnown RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 DGKGP49619 791 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 DRG2P55039 364 aaKnown RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 IFI35P80217 286 aaPredicted RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 TNK2Q07912 1038 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 AP1B1Q10567 949 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 TDGQ13569 410 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 SNX1Q13596 522 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 EIF4HQ15056 248 aaKnown RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 P3H1Q32P28 736 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 PLEKHG6Q3KR16 790 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 RNF219Q5W0B1 726 aaPredicted RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 CIR1Q86X95 450 aaPredicted RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 KLHL7Q8IXQ5 586 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 AHI1Q8N157 1196 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 KDM1BQ8NB78 822 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 UBXN4Q92575 508 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 MAML1Q92585 1016 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 RUBCNQ92622 972 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 TTC17Q96AE7 1141 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 ALG14Q96F25 216 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 ASIC4Q96FT7 647 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 P2RY11Q96G91 374 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 CELF6Q96J87 481 aaKnown RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 CCDC114Q96M63 670 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 LGMNQ99538 433 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 SPON2Q9BUD6 331 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 COL25A1Q9BXS0 654 aaPredicted RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 RAB17Q9H0T7 212 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 SP110Q9HB58 689 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 ATP13A1Q9HD20 1204 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 SLC2A4RGQ9NR83 387 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 VPS28Q9UK41 221 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 UTP11Q9Y3A2 253 aaKnown RBP10.91□□□□□ -0.66
RTF1-202ENST00000462276 MFHAS1Q9Y4C4 1052 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 ANAPC1Q9H1A4 1944 aa10.91□□□□□ -0.66
RTF1-202ENST00000462276 ATG2AQ2TAZ0 1938 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TTC28Q96AY4 2481 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 A0A0A0MRY4 1105 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 A0A0D9SEW6 157 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TARSL2A2RTX5 802 aaKnown RBP10.9□□□□□ -0.66
RTF1-202ENST00000462276 SMAPO00193 183 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 RIOK3O14730 519 aaKnown RBP10.9□□□□□ -0.66
RTF1-202ENST00000462276 NPC1O15118 1278 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 KCNN4O15554 427 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TULP3O75386 442 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 CISD3P0C7P0 127 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 CCNB1P14635 433 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 RBL1P28749 1068 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 HLA-FP30511 346 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 GJA4P35212 333 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 CLCN6P51797 869 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 C2orf54Q08AI8 447 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 LMAN2Q12907 356 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 GRM2Q14416 872 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 PPP1R7Q15435 360 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TEX44Q53QW1 395 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 FSCBQ5H9T9 825 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 MARC1Q5VT66 337 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TRIM68Q6AZZ1 485 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 ITPRIPL1Q6GPH6 555 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 GRAMD4Q6IC98 578 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 C8orf74Q6P047 294 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TTC27Q6P3X3 843 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 RALGPS2Q86X27 583 aaPredicted RBP10.9□□□□□ -0.66
RTF1-202ENST00000462276 ZNF354CQ86Y25 554 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TEX26Q8N6G2 289 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 FAM71DQ8N9W8 422 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 BBOF1Q8ND07 529 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 BHMTQ93088 406 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 LRRC45Q96CN5 670 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 ZFYVE19Q96K21 471 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 SPATA13Q96N96 652 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 IL12RB2Q99665 862 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TMEM121Q9BTD3 319 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 RPP25Q9BUL9 199 aaKnown RBP10.9□□□□□ -0.66
RTF1-202ENST00000462276 FAM129AQ9BZQ8 928 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 PCDH9Q9HC56 1237 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 ABCB8Q9NUT2 735 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 DNAJC17Q9NVM6 304 aaKnown RBP10.9□□□□□ -0.66
RTF1-202ENST00000462276 PLK2Q9NYY3 685 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 PAK5Q9P286 719 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 SEPT3Q9UH03 358 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 GGA2Q9UJY4 613 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 SLC8A2Q9UPR5 921 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 DOCK6Q96HP0 2047 aa10.9□□□□□ -0.66
RTF1-202ENST00000462276 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.89□□□□□ -0.67
RTF1-202ENST00000462276 CBX4O00257 560 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 ZMPSTE24O75844 475 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 NEBLO76041 1014 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 SRPRAP08240 638 aaKnown RBP10.89□□□□□ -0.67
RTF1-202ENST00000462276 SRFP11831 508 aa10.89□□□□□ -0.67
RTF1-202ENST00000462276 POLR2EP19388 210 aaKnown RBP10.89□□□□□ -0.67
RTF1-202ENST00000462276 MCM3P25205 808 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms