RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 DPYSL3Q14195 570 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ATP13A4Q4VNC1 1196 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ODF2Q5BJF6 829 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 IL31Q6EBC2 164 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ZC3H14Q6PJT7 736 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 TSSK4Q6SA08 328 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 TMCO3Q6UWJ1 677 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ZNF662Q6ZS27 426 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 RASSF3Q86WH2 238 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ZNF354CQ86Y25 554 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 KIAA1524Q8TCG1 905 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 NELL1Q92832 810 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 MYO19Q96H55 970 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 RPL10LQ96L21 214 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CALN1Q9BXU9 219 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 NOL6Q9H6R4 1146 aaKnown RBP11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 LRRC19Q9H756 370 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CD248Q9HCU0 757 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 EBF1Q9UH73 591 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 HYOU1Q9Y4L1 999 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ARIH1Q9Y4X5 557 aaPredicted RBP11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 PCDHGA2Q9Y5H1 932 aa11.93□□□□□ -0.5
TRAF3IP1-204ENST00000462122 EDDM13A0A1B0GTR0 161 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 TARSL2A2RTX5 802 aaKnown RBP11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 LRRD1A4D1F6 860 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ARHGAP42A6NI28 874 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 RASA4BC9J798 803 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 H0Y858 1186 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 DCLK1O15075 740 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 RASA4O43374 803 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ATP9BO43861 1147 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 SNAP91O60641 907 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ZMPSTE24O75844 475 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 KRT1P04264 644 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CD48P09326 243 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ATXN8OSP0DMR3 200 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 SRCP12931 536 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 HLA-EP13747 358 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 COL9A1P20849 921 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 KDELR1P24390 212 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 IL4RP24394 825 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 NUMBP49757 651 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 STK19P49842 368 aaPredicted RBP11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CAMK2GQ13555 558 aaPredicted RBP11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ANO7Q6IWH7 933 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 WDR5BQ86VZ2 330 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 SH2D3CQ8N5H7 860 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 LRRC57Q8N9N7 239 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ATP11CQ8NB49 1132 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 UBE2Q2Q8WVN8 375 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CASKIN2Q8WXE0 1202 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 RAPGEF5Q92565 580 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 FAF2Q96CS3 445 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 HMCESQ96FZ2 354 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 GOLPH3Q9H4A6 298 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 PRDM16Q9HAZ2 1276 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 KLHL11Q9NVR0 708 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 POLR3BQ9NW08 1133 aaPredicted RBP11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ZSCAN32Q9NX65 697 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 BCCIPQ9P287 314 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 SLCO3A1Q9UIG8 710 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 RAD54BQ9Y620 910 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 MUC6Q6W4X9 2439 aa11.92□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CACNA1IQ9P0X4 2223 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CACNA1HO95180 2353 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 A0A0U1RQJ8 604 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CCDC66A2RUB6 948 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 GRID2IPA4D2P6 1211 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 TTC34A8MYJ7 566 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 AXIN1O15169 862 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 KDELR3O43731 214 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 PALMO75781 387 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 TNNT1P13805 278 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 AMPD1P23109 780 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 GLDCP23378 1020 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CNR2P34972 360 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CTNNA1P35221 906 aaKnown RBP11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ACVRL1P37023 503 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 SERPINH1P50454 418 aaKnown RBP11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ARF5P84085 180 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 CCDC173Q0VFZ6 552 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 MMRN1Q13201 1228 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 SERINC3Q13530 473 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ELAVL3Q14576 367 aaKnown RBP11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ANKRD20A8PQ5CZ79 823 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 AFMIDQ63HM1 303 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 KIAA1211LQ6NV74 962 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 KATNAL2Q8IYT4 538 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 NPWQ8N729 165 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ZNF366Q8N895 744 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ZBTB44Q8NCP5 570 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 MDGA1Q8NFP4 955 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 OR2T3Q8NH03 318 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 PCDH19Q8TAB3 1148 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 FRS2Q8WU20 508 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 HMGB4Q8WW32 186 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 ATRIPQ8WXE1 791 aa11.91□□□□□ -0.5
TRAF3IP1-204ENST00000462122 RBM41Q96IZ5 413 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms