RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SARDHQ9UL12 918 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 PPM1HQ9ULR3 514 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 HS3ST2Q9Y278 367 aa19.44■□□□□ 0.7
VARS-220ENST00000461874 MCF2LO15068 1137 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 ALOX15BO15296 676 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 SNAP91O60641 907 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 MBD3O95983 291 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 MT-CO1P00395 513 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 UNGP13051 313 aaPredicted RBP19.43■□□□□ 0.7
VARS-220ENST00000461874 CDK11BP21127 795 aaKnown RBP19.43■□□□□ 0.7
VARS-220ENST00000461874 CTSKP43235 329 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 ATP11AP98196 1134 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 UBXN1Q04323 297 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 ZNF423Q2M1K9 1284 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 KCNT1Q5JUK3 1230 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 C6orf118Q5T5N4 469 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 FAM46CQ5VWP2 391 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.43■□□□□ 0.7
VARS-220ENST00000461874 Q6ZVU0 165 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 APTXQ7Z2E3 356 aaKnown RBP19.43■□□□□ 0.7
VARS-220ENST00000461874 TFAP2DQ7Z6R9 452 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 PHLDB2Q86SQ0 1253 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 NEK11Q8NG66 645 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 SETD7Q8WTS6 366 aaKnown RBP19.43■□□□□ 0.7
VARS-220ENST00000461874 PCMTD1Q96MG8 357 aaPredicted RBP19.43■□□□□ 0.7
VARS-220ENST00000461874 PCDHB18PQ96TA0 734 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 C11orf70Q9BRQ4 267 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 HSD3B7Q9H2F3 369 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 VPS51Q9UID3 782 aa19.43■□□□□ 0.7
VARS-220ENST00000461874 TPX2Q9ULW0 747 aaKnown RBP19.43■□□□□ 0.7
VARS-220ENST00000461874 A0A0D9SEW6 157 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 PLK4O00444 970 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 KCNK3O14649 394 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 VILLO15195 856 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 SLC7A4O43246 635 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 SRGAP2O75044 1071 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 PROS1P07225 676 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 SRCP12931 536 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 OR1E1P30953 314 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 CCDC14Q49A88 953 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 ADAT2Q7Z6V5 191 aaKnown RBP19.42■□□□□ 0.7
VARS-220ENST00000461874 GLRX5Q86SX6 157 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 DCAF4L2Q8NA75 395 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 RXFP2Q8WXD0 754 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 SLC6A18Q96N87 628 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 ERGIC2Q96RQ1 377 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 TMEM121BQ9BXQ6 578 aaPredicted RBP19.42■□□□□ 0.7
VARS-220ENST00000461874 ACE2Q9BYF1 805 aaPredicted RBP19.42■□□□□ 0.7
VARS-220ENST00000461874 ZNF212Q9UDV6 495 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 NEUROG3Q9Y4Z2 214 aa19.42■□□□□ 0.7
VARS-220ENST00000461874 IGF2RP11717 2491 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3DA0A087WVF3 549 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3IA0A087WXS9 549 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3EA0A087X179 549 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3KA0A087X1G2 549 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 ILVBLA1L0T0 632 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3FA6NER0 549 aaPredicted RBP19.41■□□□□ 0.7
VARS-220ENST00000461874 C2CD4BA6NLJ0 364 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 C1QTNF9BB2RNN3 333 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3LB9A6J9 549 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 C1QTNF3-AMACRE9PGA6 284 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 H0Y8X5 98 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 K7ERQ8 282 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 RTN2O75298 545 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3HP0C7X1 549 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 C1QTNF9P0C862 333 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 SDC4P31431 198 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 C21orf59P57076 290 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 PTP4A2Q12974 167 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 SUZ12Q15022 739 aaKnown RBP19.41■□□□□ 0.7
VARS-220ENST00000461874 C15orf59Q2T9L4 293 aaPredicted RBP19.41■□□□□ 0.7
VARS-220ENST00000461874 RAB6CQ53S08 254 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3GQ6DHY5 549 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3CQ6IPX1 549 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 UNQ6494/PRO21346Q6UXR6 183 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 RAB44Q7Z6P3 723 aaPredicted RBP19.41■□□□□ 0.7
VARS-220ENST00000461874 TBC1D3Q8IZP1 549 aaPredicted RBP19.41■□□□□ 0.7
VARS-220ENST00000461874 ATP11CQ8NB49 1132 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 PIP4K2CQ8TBX8 421 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 ZYG11BQ9C0D3 744 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 RAB6CQ9H0N0 254 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 KDM4CQ9H3R0 1056 aa19.41■□□□□ 0.7
VARS-220ENST00000461874 PPARGC1AQ9UBK2 798 aaKnown RBP19.41■□□□□ 0.7
VARS-220ENST00000461874 FLRT2O43155 660 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 LATO43561 262 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 PLRG1O43660 514 aaKnown RBP19.4■□□□□ 0.7
VARS-220ENST00000461874 BNIP3LO60238 219 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 KRT37O76014 449 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 GJB6O95452 261 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 WNT1P04628 370 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 FTH1P19P0C7X4 201 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 RRM1P23921 792 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 ADRA1BP35368 520 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 PTPN9P43378 593 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 NSFP46459 744 aaKnown RBP19.4■□□□□ 0.7
VARS-220ENST00000461874 CLCN6P51797 869 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 PPP2CBP62714 309 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 PPP2CAP67775 309 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 TYRO3Q06418 890 aa19.4■□□□□ 0.7
VARS-220ENST00000461874 CNTN1Q12860 1018 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms