RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 C5orf22Q49AR2 442 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 FAM76BQ5HYJ3 339 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 FAM171A1Q5VUB5 890 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 RINT1Q6NUQ1 792 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 Q6ZSV7 163 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 TMEM200AQ86VY9 491 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 GATAD2AQ86YP4 633 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 ZDHHC23Q8IYP9 409 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 HORMAD2Q8N7B1 307 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 TMED6Q8WW62 240 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 APOLD1Q96LR9 279 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 FIZ1Q96SL8 496 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 GDF15Q99988 308 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 IFT27Q9BW83 186 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 ARL15Q9NXU5 204 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 PLEKHB1Q9UF11 243 aaPredicted RBP2.87□□□□□ -1.95
SYPL1-203ENST00000460770 SLC25A13Q9UJS0 675 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 RAB21Q9UL25 225 aa2.87□□□□□ -1.95
SYPL1-203ENST00000460770 TRPC5Q9UL62 973 aaPredicted RBP2.87□□□□□ -1.95
SYPL1-203ENST00000460770 SRRM3A6NNA2 597 aaPredicted RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 RNMTO43148 476 aaKnown RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 ITM2AO43736 263 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 CCNT1O60563 726 aaKnown RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 UMODP07911 640 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 HARSP12081 509 aaKnown RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 UNGP13051 313 aaPredicted RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 GNLYP22749 145 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 C21orf33P30042 268 aaPredicted RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 RFX5P48382 616 aaPredicted RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 DLX5P56178 289 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 RHAGQ02094 409 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 RNASELQ05823 741 aaKnown RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 DDR1Q08345 913 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 PMS2P11Q13670 270 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 ZACNQ401N2 412 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 PLEKHO1Q53GL0 409 aaPredicted RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 HIBCHQ6NVY1 386 aaPredicted RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.86□□□□□ -1.952e-6■■□□□ 14.1
SYPL1-203ENST00000460770 MON1BQ7L1V2 547 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 C14orf80Q86SX3 495 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 WDR75Q8IWA0 830 aaKnown RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 TIFAQ96CG3 184 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 HIPK3Q9H422 1215 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 EPS8L2Q9H6S3 715 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 LIN7CQ9NUP9 197 aaKnown RBP2.86□□□□□ -1.95
SYPL1-203ENST00000460770 ZDHHC7Q9NXF8 308 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 CNTN6Q9UQ52 1028 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 PKP3Q9Y446 797 aa2.86□□□□□ -1.95
SYPL1-203ENST00000460770 EFCAB8A8MWE9 144 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 M0QYT0 321 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 NTN3O00634 580 aaPredicted RBP2.85□□□□□ -1.95
SYPL1-203ENST00000460770 PCDH17O14917 1159 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 RPP40O75818 363 aaKnown RBP2.85□□□□□ -1.95
SYPL1-203ENST00000460770 SOX30O94993 753 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 NPPBP16860 134 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 AKT1P31749 480 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 PDLIM4P50479 330 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 CLCNKBP51801 687 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 PMS2P54278 862 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 TMPRSS3P57727 454 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 SF3A3Q12874 501 aaKnown RBP eCLIP2.85□□□□□ -1.95
SYPL1-203ENST00000460770 GRM4Q14833 912 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 SAFBQ15424 915 aaKnown RBP eCLIP2.85□□□□□ -1.95
SYPL1-203ENST00000460770 RAB30Q15771 203 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 SLC35G1Q2M3R5 365 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 COBLL1Q53SF7 1204 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 FAM209BQ5JX69 171 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 CCDC181Q5TID7 509 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 SLC30A9Q6PML9 568 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 PATL1Q86TB9 770 aaKnown RBP2.85□□□□□ -1.95
SYPL1-203ENST00000460770 LMNTD1Q8N9Z9 388 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 RSC1A1Q92681 617 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 TBCBQ99426 244 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 NPAS1Q99742 590 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 IGSF9Q9P2J2 1179 aa2.85□□□□□ -1.95
SYPL1-203ENST00000460770 IGHV4-28A0A0C4DH34 117 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 LINC01553A4QN01 128 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 IGLV2-11P01706 119 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 ANOS1P23352 680 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 TNFSF4P23510 183 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 PRKCHP24723 683 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 GSTM2P28161 218 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 RFC1P35251 1148 aaPredicted RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 PPP3CCP48454 512 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 RCAN1P53805 252 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 ALKBH1Q13686 389 aaKnown RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 MRGPRG-AS1Q2M3A8 158 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 CEP85LQ5SZL2 805 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 ATPAF1Q5TC12 328 aaPredicted RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 IZUMO3Q5VZ72 239 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 PMS2CLQ68D20 193 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 CCAR1Q8IX12 1150 aaKnown RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 MUC20Q8N307 709 aaPredicted RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 MIGA1Q8NAN2 632 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 CEP76Q8TAP6 659 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 FAM110DQ8TAY7 271 aaPredicted RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 TSR2Q969E8 191 aaKnown RBP2.84□□□□□ -1.95
SYPL1-203ENST00000460770 ADGRG7Q96K78 797 aa2.84□□□□□ -1.95
SYPL1-203ENST00000460770 FRG2BQ96QU4 278 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms