RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 RRN3Q9NYV6 651 aa14.09□□□□□ -0.15
SCAMP4-206ENST00000460767 IFNKQ9P0W0 207 aa14.09□□□□□ -0.15
SCAMP4-206ENST00000460767 XPO7Q9UIA9 1087 aaKnown RBP14.09□□□□□ -0.15
SCAMP4-206ENST00000460767 PLXNA2O75051 1894 aa14.09□□□□□ -0.15
SCAMP4-206ENST00000460767 GOLGA6L19H0YKK7 550 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 GRAP2O75791 330 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 CYBBP04839 570 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 HNRNPH3P31942 346 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 CXCR3P49682 368 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 TPM4P67936 248 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 TLE3Q04726 772 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 C1QBPQ07021 282 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 SLC25A52Q3SY17 297 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 C5orf22Q49AR2 442 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 ZC3H12AQ5D1E8 599 aaKnown RBP14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 MMS22LQ6ZRQ5 1243 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 ZNF571Q7Z3V5 609 aaPredicted RBP14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 WFIKKN2Q8TEU8 576 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 CENPIQ92674 756 aaPredicted RBP14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 FGF11Q92914 225 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 BHMTQ93088 406 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 IQCDQ96DY2 449 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 ACE2Q9BYF1 805 aaPredicted RBP14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.08□□□□□ -0.163e-6■■■■□ 24.5
SCAMP4-206ENST00000460767 CAPN11Q9UMQ6 739 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 NUMA1Q14980 2115 aa14.08□□□□□ -0.16
SCAMP4-206ENST00000460767 MYLKQ15746 1914 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 KALRNO60229 2985 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 C2CD4BA6NLJ0 364 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 CCDC172P0C7W6 258 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 GZMAP12544 262 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 HLA-FP30511 346 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 CDK17Q00537 523 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 RHDQ02161 417 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 ARID5AQ03989 594 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 MPPE1Q53F39 396 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 MS4A13Q5J8X5 152 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 KCNT1Q5JUK3 1230 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 FAM102AQ5T9C2 384 aaPredicted RBP14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 HES3Q5TGS1 186 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 SARM1Q6SZW1 724 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 USP30Q70CQ3 517 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 FAM124AQ86V42 546 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 ZNF683Q8IZ20 524 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 C3orf20Q8ND61 904 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 SAP25Q8TEE9 199 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 SKA1Q96BD8 255 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 VCPIP1Q96JH7 1222 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 CNDP2Q96KP4 475 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 BTN2A3PQ96KV6 586 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 NUCKS1Q9H1E3 243 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 HAUS4Q9H6D7 363 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 PIGVQ9NUD9 493 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 TMEM51Q9NW97 253 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 ARHGEF38Q9NXL2 777 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 TAS2R14Q9NYV8 317 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 TPX2Q9ULW0 747 aaKnown RBP14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 NENFQ9UMX5 172 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 SCML1Q9UN30 329 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 KNTC1P50748 2209 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 ZNF462Q96JM2 2506 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 CHD5Q8TDI0 1954 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 MAST4O15021 2626 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 BPTFQ12830 3046 aa14.07□□□□□ -0.16
SCAMP4-206ENST00000460767 GOLGA6L7A0A1B0GV03 622 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 A0A1W2PPC4 97 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 CYSRT1A8MQ03 144 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 DDX3XO00571 662 aaKnown RBP eCLIP14.06□□□□□ -0.167e-10■■■□□ 17.7
SCAMP4-206ENST00000460767 LDOC1O95751 146 aaPredicted RBP14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 IGHV4-34P06331 123 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 SLC2A3P11169 496 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 CCR1P32246 355 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 ACTN2P35609 894 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 SLC11A2P49281 568 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 C21orf59P57076 290 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 RPS14P62263 151 aaKnown RBP14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 ZBED6P86452 979 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 SEMG2Q02383 582 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 TARDBPQ13148 414 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 MTA1Q13330 715 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 SHBQ15464 509 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 TBC1D25Q3MII6 688 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 TTC31Q49AM3 519 aaPredicted RBP14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 KIAA0895LQ68EN5 471 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 RFWD3Q6PCD5 774 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 LAYNQ6UX15 382 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 CACUL1Q86Y37 369 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 MSANTD4Q8NCY6 345 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 WFDC5Q8TCV5 224 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 C11orf70Q9BRQ4 267 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 CIPCQ9C0C6 399 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 PDCL3Q9H2J4 239 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 SYNCQ9H7C4 482 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 DDIT4Q9NX09 232 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 AK5Q9Y6K8 562 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 COL6A6A6NMZ7 2263 aa14.06□□□□□ -0.16
SCAMP4-206ENST00000460767 SIGLEC16A6NMB1 481 aa14.05□□□□□ -0.16
SCAMP4-206ENST00000460767 M0QYT0 321 aa14.05□□□□□ -0.16
SCAMP4-206ENST00000460767 KCNK3O14649 394 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms