RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 SERINC3Q13530 473 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 SPARCL1Q14515 664 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 FAM217AQ8IXS0 508 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 AGGF1Q8N302 714 aaeCLIP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 LEMD2Q8NC56 503 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 DDI1Q8WTU0 396 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 ARHGEF2Q92974 986 aaKnown RBP17.2■□□□□ 0.34
NELFCD-201ENST00000460601 TEKT5Q96M29 485 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 ZIM3Q96PE6 472 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 FERMT1Q9BQL6 677 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 FAM129AQ9BZQ8 928 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 LINC00597Q9H2U6 94 aa17.2■□□□□ 0.34
NELFCD-201ENST00000460601 TTC24A2A3L6 582 aaPredicted RBP17.19■□□□□ 0.34
NELFCD-201ENST00000460601 ARHGAP42A6NI28 874 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 AGPSO00116 658 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 CHADO15335 359 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 GJB3O75712 270 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 ACSL3O95573 720 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 HLA-DQB2P05538 268 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 DDX6P26196 483 aaKnown RBP eCLIP17.19■□□□□ 0.34
NELFCD-201ENST00000460601 ETFBP38117 255 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 GNA12Q03113 381 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 SEMA5AQ13591 1074 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 HIF1AQ16665 826 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 PARP15Q460N3 678 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 SYCE2Q6PIF2 218 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 ELMSAN1Q6PJG2 1045 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 CAPN12Q6ZSI9 719 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 ZNF534Q76KX8 674 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 HOOK3Q86VS8 718 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 ANKMY2Q8IV38 441 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 ZBED8Q8IZ13 594 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 SPATA22Q8NHS9 363 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 SERPINB12Q96P63 405 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 SP110Q9HB58 689 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 SAYSD1Q9NPB0 183 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 RSPH14Q9UHP6 348 aa17.19■□□□□ 0.34
NELFCD-201ENST00000460601 BPTFQ12830 3046 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 E7EVH7 732 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 H0Y626 953 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 USP12O75317 370 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 LATS1O95835 1130 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 SHBGP04278 402 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 HOXD9P28356 352 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 MAXP61244 160 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 PDIA2Q13087 525 aaKnown RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 ZNF177Q13360 481 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 KYNUQ16719 465 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 IL31Q6EBC2 164 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 GET4Q7L5D6 327 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 CDCA3Q99618 268 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 SPON2Q9BUD6 331 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 TTYH1Q9H313 450 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 PLAAQ9Y263 795 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 MYOFQ9NZM1 2061 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 CHD5Q8TDI0 1954 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 ZNF197O14709 1029 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 MT-CYBP00156 380 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 RHOCP08134 193 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 POU2F2P09086 479 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 PFKLP17858 780 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 MZF1P28698 734 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 VIPR2P41587 438 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 IFI35P80217 286 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 SLC29A2Q14542 456 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 ZNF77Q15935 545 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 EP400NLQ6ZTU2 488 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 CAND1Q86VP6 1230 aaKnown RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 NPAS3Q8IXF0 933 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 IQCKQ8N0W5 287 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 FGF13Q92913 245 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 RSPRY1Q96DX4 576 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 IL12RB2Q99665 862 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 DDX50Q9BQ39 737 aaKnown RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 GBA3Q9H227 469 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 PABPC3Q9H361 631 aaKnown RBP17.18■□□□□ 0.34
NELFCD-201ENST00000460601 RBM22Q9NW64 420 aaKnown RBP eCLIP17.18■□□□□ 0.346e-7■■■■□ 20.6
NELFCD-201ENST00000460601 IGSF9Q9P2J2 1179 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 TBC1D30Q9Y2I9 924 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 WNT6Q9Y6F9 365 aa17.18■□□□□ 0.34
NELFCD-201ENST00000460601 GOLGA6BA6NDN3 693 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 MTSS1O43312 755 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 RIPK2O43353 540 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 ZNF33AQ06730 810 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 CDH18Q13634 790 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 GRIN2CQ14957 1233 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 SLMAPQ14BN4 828 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 PARP6Q2NL67 630 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 C6orf118Q5T5N4 469 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 RNF219Q5W0B1 726 aaPredicted RBP17.17■□□□□ 0.34
NELFCD-201ENST00000460601 TIGD7Q6NT04 549 aaPredicted RBP17.17■□□□□ 0.34
NELFCD-201ENST00000460601 CHST9Q7L1S5 443 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 TMEM25Q86YD3 366 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 IGDCC3Q8IVU1 814 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 HJURPQ8NCD3 748 aaPredicted RBP17.17■□□□□ 0.34
NELFCD-201ENST00000460601 PPP2R3CQ969Q6 453 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 EXOC4Q96A65 974 aa17.17■□□□□ 0.34
NELFCD-201ENST00000460601 OXNAD1Q96HP4 312 aaPredicted RBP17.17■□□□□ 0.34
NELFCD-201ENST00000460601 TRIM56Q9BRZ2 755 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms