RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 J3KR12 359 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 TRDMT1O14717 391 aaKnown RBP17.71■□□□□ 0.43
CDK11A-209ENST00000460465 RAMP2O60895 175 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 PIAS1O75925 651 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 SUN1O94901 812 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 HLA-DQB2P05538 268 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 SESN2P58004 480 aaPredicted RBP17.71■□□□□ 0.43
CDK11A-209ENST00000460465 PRPSAP1Q14558 356 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 POLD3Q15054 466 aaPredicted RBP17.71■□□□□ 0.43
CDK11A-209ENST00000460465 ANO4Q32M45 955 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 TTC19Q6DKK2 380 aaPredicted RBP17.71■□□□□ 0.43
CDK11A-209ENST00000460465 GAREM2Q75VX8 874 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 ZNF354CQ86Y25 554 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 ARHGEF2Q92974 986 aaKnown RBP17.71■□□□□ 0.43
CDK11A-209ENST00000460465 TRIM56Q9BRZ2 755 aaKnown RBP17.71■□□□□ 0.43
CDK11A-209ENST00000460465 PPCSQ9HAB8 311 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 RBM22Q9NW64 420 aaKnown RBP eCLIP17.71■□□□□ 0.43
CDK11A-209ENST00000460465 UBP1Q9NZI7 540 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 SLC24A2Q9UI40 661 aa17.71■□□□□ 0.43
CDK11A-209ENST00000460465 ERI2A8K979 691 aaKnown RBP17.7■□□□□ 0.42
CDK11A-209ENST00000460465 CACNG3O60359 315 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 USP12O75317 370 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 OLFM2O95897 454 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 PEX11BO96011 259 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 MGAT1P26572 445 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 CRADDP78560 199 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 DMTNQ08495 405 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 RABGAP1LQ5R372 815 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 UNC5AQ6ZN44 842 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 ELMOD1Q8N336 334 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 OR52K1Q8NGK4 314 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 OXNAD1Q96HP4 312 aaPredicted RBP17.7■□□□□ 0.42
CDK11A-209ENST00000460465 SP110Q9HB58 689 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 GLOD4Q9HC38 313 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 FETUBQ9UGM5 382 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 SDR42E2A6NKP2 422 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 HDCP19113 662 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 SGSHP51688 502 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 CLCN4P51793 760 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 RPS24P62847 133 aaKnown RBP17.7■□□□□ 0.42
CDK11A-209ENST00000460465 SMAD3P84022 425 aaKnown RBP17.7■□□□□ 0.42
CDK11A-209ENST00000460465 PARP15Q460N3 678 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 TAOK1Q7L7X3 1001 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 MICAL1Q8TDZ2 1067 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 SLC22A17Q8WUG5 538 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 STAMBPL1Q96FJ0 436 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 PAFAH2Q99487 392 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 SELENOSQ9BQE4 189 aa17.7■□□□□ 0.42
CDK11A-209ENST00000460465 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.7■□□□□ 0.42
CDK11A-209ENST00000460465 GRXCR1A8MXD5 290 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 C5orf67F2Z3F1 127 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 CCL16O15467 120 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 NEBLO76041 1014 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 STX2P32856 288 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 ACVRL1P37023 503 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 YBEYP58557 167 aaPredicted RBP17.69■□□□□ 0.42
CDK11A-209ENST00000460465 GNGT1P63211 74 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 GUCY1A3Q02108 690 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 UBE3AQ05086 875 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 C9orf50Q5SZB4 431 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 ADGRF1Q5T601 910 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 SPATA22Q8NHS9 363 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 MRPS31Q92665 395 aaKnown RBP17.69■□□□□ 0.42
CDK11A-209ENST00000460465 FATE1Q969F0 183 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 FCRL5Q96RD9 977 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 CYTH2Q99418 400 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 SYBUQ9NX95 663 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 PSMC3IPQ9P2W1 217 aaPredicted RBP17.69■□□□□ 0.42
CDK11A-209ENST00000460465 PCDHA11Q9Y5I1 949 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 CPQQ9Y646 472 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 HELZP42694 1942 aaKnown RBP17.69■□□□□ 0.42
CDK11A-209ENST00000460465 SHOX2O60902 331 aaPredicted RBP17.69■□□□□ 0.42
CDK11A-209ENST00000460465 GSTA2P09210 222 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 IRS1P35568 1242 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 CDH4P55283 916 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 SERINC3Q13530 473 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 KBTBD12Q3ZCT8 623 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 PPM1LQ5SGD2 360 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 CASC4Q6P4E1 433 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 PRPF39Q86UA1 669 aaKnown RBP17.69■□□□□ 0.42
CDK11A-209ENST00000460465 KLHDC8BQ8IXV7 354 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 ADAMTS19Q8TE59 1207 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 CORO1BQ9BR76 489 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 DHRS4Q9BTZ2 278 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 LRRC40Q9H9A6 602 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 CASS4Q9NQ75 786 aa17.69■□□□□ 0.42
CDK11A-209ENST00000460465 LAMA2P24043 3122 aaKnown RBP17.68■□□□□ 0.42
CDK11A-209ENST00000460465 H3BNC9 293 aa17.68■□□□□ 0.42
CDK11A-209ENST00000460465 NRG2O14511 850 aaPredicted RBP17.68■□□□□ 0.42
CDK11A-209ENST00000460465 SCAMP3O14828 347 aaKnown RBP17.68■□□□□ 0.42
CDK11A-209ENST00000460465 GRM6O15303 877 aa17.68■□□□□ 0.42
CDK11A-209ENST00000460465 TSPAN3O60637 253 aa17.68■□□□□ 0.42
CDK11A-209ENST00000460465 LPXNO60711 386 aa17.68■□□□□ 0.42
CDK11A-209ENST00000460465 MDH1P40925 334 aaKnown RBP17.68■□□□□ 0.42
CDK11A-209ENST00000460465 ZXDBP98169 803 aa17.68■□□□□ 0.42
CDK11A-209ENST00000460465 HNRNPDQ14103 355 aaKnown RBP17.68■□□□□ 0.42
CDK11A-209ENST00000460465 RASA2Q15283 850 aa17.68■□□□□ 0.42
CDK11A-209ENST00000460465 FAM109BQ6ICB4 259 aaPredicted RBP17.68■□□□□ 0.42
CDK11A-209ENST00000460465 MAB21L3Q8N8X9 362 aa17.68■□□□□ 0.42
CDK11A-209ENST00000460465 GSDMBQ8TAX9 411 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms