RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-209ENST00000459963 FIGNL2A6NMB9 653 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 SLC31A1O15431 190 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 SLC7A4O43246 635 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 PDGFRBP09619 1106 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 PRLRP16471 622 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 KLK2P20151 261 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 CHMLP26374 656 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 LIG4P49917 911 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 PGDP52209 483 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 SLC5A3P53794 718 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 PMS2P54278 862 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 PPP2R2AP63151 447 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 MAPK7Q13164 816 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 GNL2Q13823 731 aaKnown RBP8.3□□□□□ -1.08
NCSTN-209ENST00000459963 C16orf72Q14CZ0 275 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 PHF19Q5T6S3 580 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 CREB3L3Q68CJ9 461 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 JMJD6Q6NYC1 403 aaPredicted RBP8.3□□□□□ -1.08
NCSTN-209ENST00000459963 Q6ZSR6 202 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 KIAA0907Q7Z7F0 614 aaPredicted RBP8.3□□□□□ -1.08
NCSTN-209ENST00000459963 ABI3BPQ7Z7G0 1075 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 DCP2Q8IU60 420 aaKnown RBP8.3□□□□□ -1.08
NCSTN-209ENST00000459963 SLITRK4Q8IW52 837 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 UNC5BQ8IZJ1 945 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 FAM177A1Q8N128 213 aaPredicted RBP8.3□□□□□ -1.08
NCSTN-209ENST00000459963 LRRC52Q8N7C0 313 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.3□□□□□ -1.08
NCSTN-209ENST00000459963 KBTBD7Q8WVZ9 684 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 NDRG1Q92597 394 aaKnown RBP8.3□□□□□ -1.08
NCSTN-209ENST00000459963 FAM129BQ96TA1 746 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 ZNF518BQ9C0D4 1074 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 CHST11Q9NPF2 352 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 FZD3Q9NPG1 666 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 TLR8Q9NR97 1041 aaKnown RBP8.3□□□□□ -1.08
NCSTN-209ENST00000459963 GPR27Q9NS67 375 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 ABCB8Q9NUT2 735 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 GGA2Q9UJY4 613 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 B3GALT1Q9Y5Z6 326 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 RNF215Q9Y6U7 377 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 ATRQ13535 2644 aa8.3□□□□□ -1.08
NCSTN-209ENST00000459963 SPTY2D1-AS1A0A0U1RR47 76 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 SFI1A8K8P3 1242 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 HNRNPDLO14979 420 aaKnown RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 MDM4O15151 490 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 LRCH4O75427 683 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 ITGB3P05106 788 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 OR52Z1P0C646 297 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 PABPC1P11940 636 aaKnown RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 HNRNPA2B1P22626 353 aaKnown RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 MAP4P27816 1152 aaKnown RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 HOXD9P28356 352 aaPredicted RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 AKT2P31751 481 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 CSTF2P33240 577 aaKnown RBP eCLIP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 ACOT2P49753 483 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 SMTNP53814 917 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 ADKP55263 362 aaKnown RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 CLDN2P57739 230 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 ST8SIA6P61647 398 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 ARHGAP44Q17R89 818 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 EARS2Q5JPH6 523 aaKnown RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 EFHC2Q5JST6 749 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 OR6B2Q6IFH4 312 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 KLHDC10Q6PID8 442 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 GCNT7Q6ZNI0 430 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 DPH6Q7L8W6 267 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 RD3Q7Z3Z2 195 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 CCNJLQ8IV13 435 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 NLGN4XQ8N0W4 816 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 CPXM2Q8N436 756 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 ARL10Q8N8L6 244 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 NLGN4YQ8NFZ3 816 aaPredicted RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 ERMNQ8TAM6 284 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 CENPTQ96BT3 561 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 SNRNP40Q96DI7 357 aaKnown RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 KCNK16Q96T55 309 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 COMMD8Q9NX08 183 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 SPASTQ9UBP0 616 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 KCNG1Q9UIX4 513 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 PILRAQ9UKJ1 303 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 KCNJ14Q9UNX9 436 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 POLHQ9Y253 713 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 RPH3AQ9Y2J0 694 aaPredicted RBP8.29□□□□□ -1.08
NCSTN-209ENST00000459963 STAB1Q9NY15 2570 aa8.29□□□□□ -1.08
NCSTN-209ENST00000459963 TNRC6AQ8NDV7 1962 aaKnown RBP8.28□□□□□ -1.08
NCSTN-209ENST00000459963 A6NNZ2 444 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 LMO7DNF2Z398 122 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 CLDN5O00501 218 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 GCATO75600 419 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 DNAJB5O75953 348 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 IL1BP01584 269 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 ANXA6P08133 673 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 VSIG8P0DPA2 414 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 FGF3P11487 239 aaPredicted RBP8.28□□□□□ -1.08
NCSTN-209ENST00000459963 FOSL1P15407 271 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 PLCG1P19174 1290 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 POLR2EP19388 210 aaKnown RBP8.28□□□□□ -1.08
NCSTN-209ENST00000459963 MUTP22033 750 aa8.28□□□□□ -1.08
NCSTN-209ENST00000459963 MZF1P28698 734 aaPredicted RBP8.28□□□□□ -1.08
NCSTN-209ENST00000459963 CORO1AP31146 461 aaKnown RBP8.28□□□□□ -1.08
NCSTN-209ENST00000459963 NECTIN1Q15223 517 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms