RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 ZYG11BQ9C0D3 744 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 CEP44Q9C0F1 390 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 SIK2Q9H0K1 926 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 NEUROG2Q9H2A3 272 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 GAREM1Q9H706 876 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 TM7SF3Q9NS93 570 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 COX16Q9P0S2 106 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 PPM1HQ9ULR3 514 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 DMTF1Q9Y222 760 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 PCDHB9Q9Y5E1 797 aa10.27□□□□□ -0.77
HDLBP-228ENST00000459788 GOLGA4Q13439 2230 aaKnown RBP10.27□□□□□ -0.77
HDLBP-228ENST00000459788 CHD6Q8TD26 2715 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ACACAQ13085 2346 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 A0A1W2PP55 124 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 C2CD4BA6NLJ0 364 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 SMTNL1A8MU46 457 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 E9PAM4 449 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 GIPC1O14908 333 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 PLRG1O43660 514 aaKnown RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 CBFA2T3O75081 653 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 RNASEH2AO75792 299 aaKnown RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 FSBPO95073 299 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 IL1BP01584 269 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 PRNPP04156 253 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 RHOCP08134 193 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 FERP16591 822 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 DESP17661 470 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 KCNA4P22459 653 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 OR1E1P30953 314 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 HTR7P34969 479 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ADRA1BP35368 520 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 CTSKP43235 329 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 MAPKAPK2P49137 400 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 STK19P49842 368 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ADPRHP54922 357 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 SIM1P81133 766 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 BNC1Q01954 994 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 UBXN1Q04323 297 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 SCAPQ12770 1279 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 NCAPHQ15003 741 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 TRIP6Q15654 476 aaKnown RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 HLA-BQ31612 363 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 NCEH1Q6PIU2 408 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 APTXQ7Z2E3 356 aaKnown RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 C14orf80Q86SX3 495 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 TRIM69Q86WT6 500 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 CACUL1Q86Y37 369 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 AADATQ8N5Z0 425 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 C3orf20Q8ND61 904 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 BAHD1Q8TBE0 780 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 FAM174AQ8TBP5 190 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 SNX19Q92543 992 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ISG20Q96AZ6 181 aaKnown RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ACE2Q9BYF1 805 aaPredicted RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ADAM33Q9BZ11 813 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 MUC3BQ9H195 1237 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ERVMER34-1Q9H9K5 563 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 PREBQ9HCU5 417 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 NLRC4Q9NPP4 1024 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 DONSONQ9NYP3 566 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ZNF212Q9UDV6 495 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 PCOLCE2Q9UKZ9 415 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 APOBEC2Q9Y235 224 aaKnown RBP10.26□□□□□ -0.77
HDLBP-228ENST00000459788 ANKRD6Q9Y2G4 727 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 MSRB2Q9Y3D2 182 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 AKAP13Q12802 2813 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 FAM208BQ5VWN6 2430 aa10.26□□□□□ -0.77
HDLBP-228ENST00000459788 PLXNB3Q9ULL4 1909 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 A0A1B0GVT2 93 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 ANKRD62A6NC57 917 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 SIGLEC16A6NMB1 481 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 EIF3CLB5ME19 914 aaKnown RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 GOLGA8SH3BPF8 625 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 I6L893 689 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 CNTN5O94779 1100 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 PROS1P07225 676 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 CDK4P11802 303 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 KRT3P12035 628 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 SRCP12931 536 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 TFE3P19532 575 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 DRD3P35462 400 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 GRK6P43250 576 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 PSMD8P48556 350 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 CSNK1EP49674 416 aaKnown RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 CCT8P50990 548 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 C21orf59P57076 290 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 TYRO3Q06418 890 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 PTP4A2Q12974 167 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 ST3GAL2Q16842 350 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 CLEC16AQ2KHT3 1053 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 KIF19Q2TAC6 998 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 ALFQ53S48 1182 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 ARTNQ5T4W7 220 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 MANEALQ5VSG8 457 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 NAPEPLDQ6IQ20 393 aa10.25□□□□□ -0.77
HDLBP-228ENST00000459788 RAB44Q7Z6P3 723 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 PRPF39Q86UA1 669 aaKnown RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 CIR1Q86X95 450 aaPredicted RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 PCDH20Q8N6Y1 951 aaKnown RBP10.25□□□□□ -0.77
HDLBP-228ENST00000459788 MFSD2AQ8NA29 543 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms