RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 SYDE1Q6ZW31 735 aaPredicted RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 PDZD4Q76G19 769 aaPredicted RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 CAND1Q86VP6 1230 aaKnown RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 NPAS3Q8IXF0 933 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 CMTM8Q8IZV2 173 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 MPP5Q8N3R9 675 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 CCNYQ8ND76 341 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 GRK7Q8WTQ7 553 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 WNT2BQ93097 391 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 VOPP1Q96AW1 172 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 ALG14Q96F25 216 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 LRCH3Q96II8 777 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 LMLNQ96KR4 655 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 SPATA13Q96N96 652 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 RUNDC3BQ96NL0 473 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 FRMD8P1Q9BZ68 369 aaPredicted RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 LMAN2LQ9H0V9 348 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 TASP1Q9H6P5 420 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 ZDHHC7Q9NXF8 308 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 FAM53CQ9NYF3 392 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 NINJ2Q9NZG7 142 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 ANAPC5Q9UJX4 755 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 TPX2Q9ULW0 747 aaKnown RBP8.94□□□□□ -0.98
RIF1-208ENST00000457745 ARHGAP26Q9UNA1 814 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 OR51B4Q9Y5P0 310 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 WNT6Q9Y6F9 365 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 CLUHO75153 1309 aa8.94□□□□□ -0.98
RIF1-208ENST00000457745 CDH23Q9H251 3354 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 FOXO6A8MYZ6 492 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 HACD1B0YJ81 288 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 USP12O75317 370 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 PIAS1O75925 651 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 MMP2P08253 660 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 POU2F2P09086 479 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 MAGEA6P43360 314 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 PPP3CCP48454 512 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 MAXP61244 160 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 TUBB4BP68371 445 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 IFI35P80217 286 aaPredicted RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 BASP1P80723 227 aaKnown RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 COG7P83436 770 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 GAB4Q2WGN9 574 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 FAM78AQ5JUQ0 283 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 RNF43Q68DV7 783 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 TRIM68Q6AZZ1 485 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 PDE12Q6L8Q7 609 aaKnown RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 CCDC70Q6NSX1 233 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 ANKRD54Q6NXT1 300 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 EMBQ6PCB8 327 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 HTR3DQ70Z44 454 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 LAPTM4BQ86VI4 370 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 CCDC25Q86WR0 208 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 TMEM25Q86YD3 366 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 ANKMY2Q8IV38 441 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 ARID3BQ8IVW6 561 aaPredicted RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 SFTPA1Q8IWL2 248 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 APCDD1Q8J025 514 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 MREGQ8N565 214 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 CCDC89Q8N998 374 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 SPATA22Q8NHS9 363 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 MAML1Q92585 1016 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 ARHGEF2Q92974 986 aaKnown RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 ATP2A3Q93084 1043 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 AZIN2Q96A70 460 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 ZFYVE19Q96K21 471 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 C9orf72Q96LT7 481 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 AGAP3Q96P47 875 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 ZIM3Q96PE6 472 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 TSGA13Q96PP4 275 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 SMIM14Q96QK8 99 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 MYADMQ96S97 322 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 CDK5RAP1Q96SZ6 601 aaKnown RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 FMO2Q99518 471 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 IL12RB2Q99665 862 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 APOL2Q9BQE5 337 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 PLA2G2FQ9BZM2 168 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 S1PR5Q9H228 398 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 CDC42EP4Q9H3Q1 356 aaKnown RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 ZNF576Q9H609 170 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 CATSPERBQ9H7T0 1116 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 ARFGAP3Q9NP61 516 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 RAB6BQ9NRW1 208 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 UBP1Q9NZI7 540 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 IPO11Q9UI26 975 aaKnown RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 INTS6Q9UL03 887 aaKnown RBP8.93□□□□□ -0.98
RIF1-208ENST00000457745 ATP8A1Q9Y2Q0 1164 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 MIA3Q5JRA6 1907 aa8.93□□□□□ -0.98
RIF1-208ENST00000457745 MUC22E2RYF6 1773 aaPredicted RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 CFAP69A5D8W1 941 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 OTOL1A6NHN0 477 aaPredicted RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 SMAPO00193 183 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 ZMPSTE24O75844 475 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 C1RP00736 705 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 C1QAP02745 245 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 F7P08709 466 aaPredicted RBP8.92□□□□□ -0.98
RIF1-208ENST00000457745 ARSAP15289 507 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 ITIH2P19823 946 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 CD70P32970 193 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 HTR7P34969 479 aa8.92□□□□□ -0.98
RIF1-208ENST00000457745 ETFBP38117 255 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms