RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 NELL1Q92832 810 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 KCTD12Q96CX2 325 aaKnown RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 PSMB7Q99436 277 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 ACE2Q9BYF1 805 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 KLC2Q9H0B6 622 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 TMEM245Q9H330 911 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 NOL6Q9H6R4 1146 aaKnown RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 CATSPERBQ9H7T0 1116 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 PCDH18Q9HCL0 1135 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 CACNA2D2Q9NY47 1150 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 DNAI1Q9UI46 699 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 SLCO3A1Q9UIG8 710 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 ERVW-1Q9UQF0 538 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 STON1Q9Y6Q2 735 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 NYNRINQ9P2P1 1898 aaKnown RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 DOCK9Q9BZ29 2069 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 THADAQ6YHU6 1953 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 FGF10O15520 208 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-206ENST00000457035 BUB1O43683 1085 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 ZMPSTE24O75844 475 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 SRPRAP08240 638 aaKnown RBP10.3□□□□□ -0.76
ATG4A-206ENST00000457035 KRT7P08729 469 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 CD48P09326 243 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 SP9P0CG40 484 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 ERCC2P18074 760 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 COMTP21964 271 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 AMPD1P23109 780 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 SSR1P43307 286 aaKnown RBP10.3□□□□□ -0.76
ATG4A-206ENST00000457035 NUMBP49757 651 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 DGKEP52429 567 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 CDH6P55285 790 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 GNA12Q03113 381 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 SULT2A1Q06520 285 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 DPYSQ14117 519 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 ZNF528Q3MIS6 628 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 LRRC38Q5VT99 294 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 SDE2Q6IQ49 451 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 KIAA1211LQ6NV74 962 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 RFX8Q6ZV50 586 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 KIAA1328Q86T90 577 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 UMODL1-AS1Q8N2C9 162 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 CAMKK1Q8N5S9 505 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 KDM1BQ8NB78 822 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 ARHGEF2Q92974 986 aaKnown RBP10.3□□□□□ -0.76
ATG4A-206ENST00000457035 CALR3Q96L12 384 aaKnown RBP10.3□□□□□ -0.76
ATG4A-206ENST00000457035 RPL10LQ96L21 214 aaKnown RBP10.3□□□□□ -0.76
ATG4A-206ENST00000457035 MUC3BQ9H195 1237 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 MAGEH1Q9H213 219 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 GOLPH3Q9H4A6 298 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.3□□□□□ -0.76
ATG4A-206ENST00000457035 VPS28Q9UK41 221 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 SLC8A2Q9UPR5 921 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 HYOU1Q9Y4L1 999 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 PTPRZ1P23471 2315 aaPredicted RBP10.3□□□□□ -0.76
ATG4A-206ENST00000457035 FAM186AA6NE01 2351 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 GPR179Q6PRD1 2367 aa10.3□□□□□ -0.76
ATG4A-206ENST00000457035 RALGAPA1Q6GYQ0 2036 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 PLXND1Q9Y4D7 1925 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 DCLK1O15075 740 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 SNAP91O60641 907 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 CD160O95971 181 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 MT-CO1P00395 513 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 HLA-EP13747 358 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 HOXB2P14652 356 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 GLDCP23378 1020 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 KDELR1P24390 212 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 PRKCHP24723 683 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 ACVRL1P37023 503 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 STK19P49842 368 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-206ENST00000457035 YBEYP58557 167 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-206ENST00000457035 DMWDQ09019 674 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 KIF5AQ12840 1032 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 DPYSL3Q14195 570 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 POLD3Q15054 466 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-206ENST00000457035 PDK2Q15119 407 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 AFMIDQ63HM1 303 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 C11orf63Q6NUN7 778 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 SERPINA13PQ6UXR4 307 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 RASSF3Q86WH2 238 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 LRRC57Q8N9N7 239 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 DCAF4L2Q8NA75 395 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 KCTD6Q8NC69 237 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 FRS2Q8WU20 508 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 RAPGEF5Q92565 580 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 ANP32BQ92688 251 aaKnown RBP10.29□□□□□ -0.76
ATG4A-206ENST00000457035 CSPG4P5Q96PW8 444 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 HHIPQ96QV1 700 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 SPON2Q9BUD6 331 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 FAM126AQ9BYI3 521 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-206ENST00000457035 LRRC19Q9H756 370 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 ETNK2Q9NVF9 386 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 DONSONQ9NYP3 566 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 RCOR3Q9P2K3 495 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-206ENST00000457035 TRIM10Q9UDY6 481 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 EBF1Q9UH73 591 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 SUN2Q9UH99 717 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 VPS51Q9UID3 782 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 RAD54BQ9Y620 910 aa10.29□□□□□ -0.76
ATG4A-206ENST00000457035 EP300Q09472 2414 aaPredicted RBP10.29□□□□□ -0.76
ATG4A-206ENST00000457035 WDR87Q6ZQQ6 2873 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms