RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	PRR11	Q96HE9	360 aa	Predicted RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	CCNL2	Q96S94	520 aa	Predicted RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	NUCKS1	Q9H1E3	243 aa	Known RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	NUP62CL	Q9H1M0	184 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	CLSTN2	Q9H4D0	955 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	MMRN2	Q9H8L6	949 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	NOTCH2	Q04721	2471 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	UTP20	O75691	2785 aa	Known RBP	13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953	DOCK9	Q9BZ29	2069 aa		13.57	□□□□□ -0.24
SNHG17-208	ENST00000456953		K7ESM1	405 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	SLC31A1	O15431	190 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	KLRC4	O43908	158 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	SMC2	O95347	1197 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	MYL1	P05976	194 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	TGM2	P21980	687 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	SULT2A1	Q06520	285 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	SLC12A1	Q13621	1099 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	CAMK4	Q16566	473 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	KLHL40	Q2TBA0	621 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	ZSCAN23	Q3MJ62	389 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	DCAF6	Q58WW2	860 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	KRT39	Q6A163	491 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	ZCCHC8	Q6NZY4	707 aa	Known RBP	13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	RBM44	Q6ZP01	1051 aa	Known RBP	13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	OR13H1	Q8NG92	308 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	TPCN2	Q8NHX9	752 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	SEMA4D	Q92854	862 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	CCDC47	Q96A33	483 aa	Known RBP	13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	FCRL2	Q96LA5	508 aa	Predicted RBP	13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	CALN1	Q9BXU9	219 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	SARDH	Q9UL12	918 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	PPM1H	Q9ULR3	514 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	TRAF3IP3	Q9Y228	551 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	ENTPD2	Q9Y5L3	495 aa		13.56	□□□□□ -0.24
SNHG17-208	ENST00000456953	TDRD6	O60522	2096 aa	Known RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	C1QTNF3-AMACR	E9PGA6	284 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	SUV39H1	O43463	412 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	TCEA3	O75764	348 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	LTF	P02788	710 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	ITGB2	P05107	769 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	PRR29	P0C7W0	189 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	LCP1	P13796	627 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	PRLR	P16471	622 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	NR2F2	P24468	414 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	AKT2	P31751	481 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	VASP	P50552	380 aa	Predicted RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	TAS2R38	P59533	333 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	HNRNPK	P61978	463 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	ZNF177	Q13360	481 aa	Predicted RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	NNT	Q13423	1086 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	PNOC	Q13519	176 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	NFIL3	Q16649	462 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	LINC00303	Q3SY05	128 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	CAVIN1	Q6NZI2	390 aa	Known RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	NEK5	Q6P3R8	708 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	FAM186B	Q8IYM0	893 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	FBXL13	Q8NEE6	735 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	WDR36	Q8NI36	951 aa	Known RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	UBA3	Q8TBC4	463 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	SERPINB11	Q96P15	392 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	MYOC	Q99972	504 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	TLR6	Q9Y2C9	796 aa		13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.55	□□□□□ -0.24
SNHG17-208	ENST00000456953		A0A1W2PQU0	124 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953		O00370	1275 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	ALOX15B	O15296	676 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	TNFSF15	O95150	251 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	ITGA2B	P08514	1039 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	SFTPC	P11686	197 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	CD19	P15391	556 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	HNRNPA2B1	P22626	353 aa	Known RBP	13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	PSMC2	P35998	433 aa	Known RBP	13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	INHBC	P55103	352 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	CDKN3	Q16667	212 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	ZNF284	Q2VY69	593 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	CCDC183	Q5T5S1	534 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	ABI3BP	Q7Z7G0	1075 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	DCP2	Q8IU60	420 aa	Known RBP	13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	LGI2	Q8N0V4	545 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	SLC22A18AS	Q8N1D0	253 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	FAM174A	Q8TBP5	190 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	SMARCE1	Q969G3	411 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	ARHGAP9	Q9BRR9	750 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	DNAJC28	Q9NX36	388 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	RAB20	Q9NX57	234 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	KIAA1257	Q9ULG3	409 aa		13.54	□□□□□ -0.24
SNHG17-208	ENST00000456953	CPED1	A4D0V7	1026 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	PMS2P1	A4D2B8	440 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	MCF2L	O15068	1137 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	EFS	O43281	561 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	ATP9B	O43861	1147 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	GABBR2	O75899	941 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	NEBL	O76041	1014 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	GJB6	O95452	261 aa		13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	MOCS2	O96007	188 aa	Predicted RBP	13.53	□□□□□ -0.24
SNHG17-208	ENST00000456953	AFP	P02771	609 aa	Known RBP	13.53	□□□□□ -0.24

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