RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ARL2P36404 184 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 GP5P40197 560 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 GRIA4P48058 902 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 RGS7P49802 495 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 GHRHRQ02643 423 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 PMS2P3Q13401 168 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 CAPSQ13938 189 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 TRIM25Q14258 630 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 XKR3Q5GH77 459 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 HEATR6Q6AI08 1181 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 ZBTB49Q6ZSB9 765 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 CDKL3Q8IVW4 592 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 CPSF7Q8N684 471 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 SNX31Q8N9S9 440 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 HM13Q8TCT9 377 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 WNK4Q96J92 1243 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 COG8Q96MW5 612 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 TMEM39BQ9GZU3 492 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 HIPK3Q9H422 1215 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 RPF2Q9H7B2 306 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 NMRAL1Q9HBL8 299 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 MAGED2Q9UNF1 606 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 SCAF8Q9UPN6 1271 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 RIPK3Q9Y572 518 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 PCDHGA7Q9Y5G6 932 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 RBM47A0AV96 593 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 PRORSD1PA6NEY8 169 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 TMEM114B3SHH9 223 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 H0YJX3 145 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 GIPC1O14908 333 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 TADA2AO75478 443 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 CLIC3O95833 236 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 C8BP07358 591 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 PGAM1P18669 254 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 GRM5P41594 1212 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 BCAP31P51572 246 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 AP3M2P53677 418 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 MAPK10P53779 464 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 NAGLUP54802 743 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 PSME3P61289 254 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 ESRRGP62508 458 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 RHDQ02161 417 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 ZNF829Q3KNS6 432 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 BOLA3Q53S33 107 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 TMEM53Q6P2H8 277 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 C16orf87Q6PH81 154 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 DCLRE1AQ6PJP8 1040 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 TMEM26Q6ZUK4 368 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 CHSY3Q70JA7 882 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 STRA8Q7Z7C7 330 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 SETD3Q86TU7 594 aaPredicted RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 DDHD1Q8NEL9 900 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 LPGAT1Q92604 370 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 BORCS5Q969J3 196 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 CERS2Q96G23 380 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 HEXIM2Q96MH2 286 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 HNRNPABQ99729 332 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 GPATCH1Q9BRR8 931 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 CXorf21Q9HAI6 301 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 SLC38A10Q9HBR0 1119 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 OXSMQ9NWU1 459 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 GMPR2Q9P2T1 348 aaKnown RBP10.5□□□□□ -0.73
CLIP4-208ENST00000456385 RAP2CQ9Y3L5 183 aa10.5□□□□□ -0.73
CLIP4-208ENST00000456385 DOCK5Q9H7D0 1870 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 PTPRFP10586 1907 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 KPNA7A9QM74 516 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 NRP1O14786 923 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 ZNF24P17028 368 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 CYP3A5P20815 502 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 GLRBP48167 497 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 SP2Q02086 613 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 NSUN2Q08J23 767 aaKnown RBP eCLIP10.49□□□□□ -0.73
CLIP4-208ENST00000456385 AARS2Q5JTZ9 985 aaKnown RBP10.49□□□□□ -0.73
CLIP4-208ENST00000456385 ZNF362Q5T0B9 420 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-208ENST00000456385 TTC33Q6PID6 262 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-208ENST00000456385 TMEM192Q8IY95 271 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 COLGALT1Q8NBJ5 622 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 TFAP2CQ92754 450 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 TANKQ92844 425 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 ZNF668Q96K58 619 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-208ENST00000456385 VPS33BQ9H267 617 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 PDZD7Q9H5P4 517 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 PPP1R1BQ9UD71 204 aaPredicted RBP10.49□□□□□ -0.73
CLIP4-208ENST00000456385 CDH7Q9ULB5 785 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 CDYLQ9Y232 598 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 TRIM17Q9Y577 477 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 CORINQ9Y5Q5 1042 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 SAC3D1A6NKF1 404 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 GOLGA8TH3BQL2 631 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 MSCO60682 206 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 USP12O75317 370 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 C2P06681 752 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 INHBBP09529 407 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 SBK3P0C264 359 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 MCF2P10911 925 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 SAT1P21673 171 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 CCND2P30279 289 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 GARSP41250 739 aaKnown RBP10.49□□□□□ -0.73
CLIP4-208ENST00000456385 MAGEA12P43365 314 aa10.49□□□□□ -0.73
CLIP4-208ENST00000456385 BMXP51813 675 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms