RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 BRD2P25440 801 aaKnown RBP23.89■■□□□ 1.41
PTPRA-208ENST00000455631 ZC3H12AQ5D1E8 599 aaKnown RBP23.89■■□□□ 1.41
PTPRA-208ENST00000455631 Q6ZVU0 165 aa23.89■■□□□ 1.41
PTPRA-208ENST00000455631 ZSWIM1Q9BR11 485 aa23.89■■□□□ 1.41
PTPRA-208ENST00000455631 USP29Q9HBJ7 922 aa23.89■■□□□ 1.41
PTPRA-208ENST00000455631 U3KQA8 63 aa23.89■■□□□ 1.41
PTPRA-208ENST00000455631 ALOX15BO15296 676 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 NEBLO76041 1014 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 AKT2P31751 481 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 DNM1Q05193 864 aaKnown RBP23.88■■□□□ 1.41
PTPRA-208ENST00000455631 DPYDQ12882 1025 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 CNGA2Q16280 664 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 ATL3Q6DD88 541 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 IGF2-ASQ6U949 168 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 ERCC4Q92889 916 aaPredicted RBP23.88■■□□□ 1.41
PTPRA-208ENST00000455631 CCDC97Q96F63 343 aaPredicted RBP23.88■■□□□ 1.41
PTPRA-208ENST00000455631 BTN2A3PQ96KV6 586 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 DUSP23Q9BVJ7 150 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 DNAJC28Q9NX36 388 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 SSUH2Q9Y2M2 353 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 PCDHB4Q9Y5E5 795 aa23.88■■□□□ 1.41
PTPRA-208ENST00000455631 COL27A1Q8IZC6 1860 aaPredicted RBP23.87■■□□□ 1.41
PTPRA-208ENST00000455631 K7ESM1 405 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 MCF2LO15068 1137 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 ATP9BO43861 1147 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 CALCAP01258 141 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 TGM2P21980 687 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 HNRNPA2B1P22626 353 aaKnown RBP23.87■■□□□ 1.41
PTPRA-208ENST00000455631 PLK1P53350 603 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 CLDN2P57739 230 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 ZNF542PQ5EBM4 170 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 PIP5KL1Q5T9C9 394 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 SYPL2Q5VXT5 272 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 CCDC81Q6ZN84 652 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 SLC22A18ASQ8N1D0 253 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 ATXN7L3BQ96GX2 97 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 NOX5Q96PH1 765 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 ST7Q9NRC1 585 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 RCOR1Q9UKL0 485 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 HPSEQ9Y251 543 aa23.87■■□□□ 1.41
PTPRA-208ENST00000455631 A0A1W2PNU3 283 aaPredicted RBP23.86■■□□□ 1.41
PTPRA-208ENST00000455631 TCAF2A6NFQ2 919 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 SCAMP1O15126 338 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 SART1O43290 800 aaKnown RBP23.86■■□□□ 1.41
PTPRA-208ENST00000455631 LZTS3O60299 673 aaPredicted RBP23.86■■□□□ 1.41
PTPRA-208ENST00000455631 CMA1P23946 247 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 SYKP43405 635 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 STILQ15468 1287 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 DLG2Q15700 870 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 CDKN3Q16667 212 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 ZNF284Q2VY69 593 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 TTC39BQ5VTQ0 682 aaPredicted RBP23.86■■□□□ 1.41
PTPRA-208ENST00000455631 CXorf57Q6NSI4 855 aaKnown RBP23.86■■□□□ 1.41
PTPRA-208ENST00000455631 FOXR1Q6PIV2 292 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 HORMAD1Q86X24 394 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 SMYD4Q8IYR2 804 aaPredicted RBP23.86■■□□□ 1.41
PTPRA-208ENST00000455631 SLC46A1Q96NT5 459 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 TRIM4Q9C037 500 aa23.86■■□□□ 1.41
PTPRA-208ENST00000455631 HEMK1Q9Y5R4 338 aaPredicted RBP23.86■■□□□ 1.41
PTPRA-208ENST00000455631 CENPBP07199 599 aaPredicted RBP23.85■■□□□ 1.41
PTPRA-208ENST00000455631 CSRP3P50461 194 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 VASPP50552 380 aaPredicted RBP23.85■■□□□ 1.41
PTPRA-208ENST00000455631 OXCT1P55809 520 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 SKOR1P84550 965 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 NFATC3Q12968 1075 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 ZSCAN23Q3MJ62 389 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 RABGAP1LQ5R372 815 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 NEK5Q6P3R8 708 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 GCNT7Q6ZNI0 430 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 PTAR1Q7Z6K3 402 aaPredicted RBP23.85■■□□□ 1.41
PTPRA-208ENST00000455631 ATP6V0D2Q8N8Y2 350 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 RNF34Q969K3 372 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 IFT43Q96FT9 208 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 TRIM62Q9BVG3 475 aa23.85■■□□□ 1.41
PTPRA-208ENST00000455631 CPED1A4D0V7 1026 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 RNF225M0QZC1 329 aaPredicted RBP23.84■■□□□ 1.41
PTPRA-208ENST00000455631 KPNA3O00505 521 aaPredicted RBP23.84■■□□□ 1.41
PTPRA-208ENST00000455631 TRUB2O95900 331 aaKnown RBP23.84■■□□□ 1.41
PTPRA-208ENST00000455631 HNRNPKP61978 463 aaKnown RBP eCLIP23.84■■□□□ 1.412e-6■■□□□ 12.3
PTPRA-208ENST00000455631 CENPCQ03188 943 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 OR6B2Q6IFH4 312 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 ZCCHC8Q6NZY4 707 aaKnown RBP23.84■■□□□ 1.41
PTPRA-208ENST00000455631 GUSBP11Q6P575 273 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 Q6ZSR6 202 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 ZNF548Q8NEK5 533 aaPredicted RBP23.84■■□□□ 1.41
PTPRA-208ENST00000455631 ARRDC3Q96B67 414 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 PPP1R9BQ96SB3 815 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 FAM117AQ9C073 453 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 WDR70Q9NW82 654 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 PCDHGA8Q9Y5G5 932 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 ENTPD2Q9Y5L3 495 aa23.84■■□□□ 1.41
PTPRA-208ENST00000455631 SPTA1P02549 2419 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.83■■□□□ 1.41
PTPRA-208ENST00000455631 PMS2P1A4D2B8 440 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 A6NNZ2 444 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 KCNU1A8MYU2 1149 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 SLC16A3O15427 465 aaKnown RBP23.83■■□□□ 1.41
PTPRA-208ENST00000455631 PCDH8O95206 1070 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 CTSLP07711 333 aa23.83■■□□□ 1.41
PTPRA-208ENST00000455631 CCDC15Q0P6D6 951 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms