RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 AADATQ8N5Z0 425 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 DEFB124Q8NES8 71 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 FAM172AQ8WUF8 416 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 CENPIQ92674 756 aaPredicted RBP21.76■■□□□ 1.07
HMGB3-205ENST00000455596 OR12D3Q9UGF7 316 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 VPS51Q9UID3 782 aa21.76■■□□□ 1.07
HMGB3-205ENST00000455596 A0A0D9SEW6 157 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 A0A1B0GTH6 734 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 ILVBLA1L0T0 632 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 ANKRD62A6NC57 917 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 LRRC53A6NM62 1247 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 ALOX15BO15296 676 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 SNAP91O60641 907 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 SERPINC1P01008 464 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 SRCP12931 536 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 CD27P26842 260 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 AFF3P51826 1226 aaKnown RBP21.75■■□□□ 1.07
HMGB3-205ENST00000455596 HDAC4P56524 1084 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 NRG1Q02297 640 aaPredicted RBP21.75■■□□□ 1.07
HMGB3-205ENST00000455596 ARTNQ5T4W7 220 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 FAM46CQ5VWP2 391 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 PPP1R2P3Q6NXS1 205 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 DNAJC24Q6P3W2 148 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 NCEH1Q6PIU2 408 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 Q6ZVU0 165 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 ATP11CQ8NB49 1132 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 OR2T34Q8NGX1 318 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 OSBPL2Q9H1P3 480 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 OSGEPQ9NPF4 335 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 FARP1Q9Y4F1 1045 aaPredicted RBP21.75■■□□□ 1.07
HMGB3-205ENST00000455596 SPTBN2O15020 2390 aa21.75■■□□□ 1.07
HMGB3-205ENST00000455596 TCRBV5S1A1TA0A578 114 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 C1QTNF3-AMACRE9PGA6 284 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 MCF2LO15068 1137 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 BNIP3LO60238 219 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 GJB3O75712 270 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 IGHV4-34P06331 123 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 TPM4P67936 248 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 ZNF252P-AS1Q0IIN9 211 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 SLC14A1Q13336 389 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 TEAD4Q15561 434 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 IL27RAQ6UWB1 636 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 PIP4P1Q86T03 277 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 MCOLN2Q8IZK6 566 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 OR7D4Q8NG98 312 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 CCDC114Q96M63 670 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 NAP1L5Q96NT1 182 aaPredicted RBP21.74■■□□□ 1.07
HMGB3-205ENST00000455596 MCEEQ96PE7 176 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 TM9SF3Q9HD45 589 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 ZNF212Q9UDV6 495 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 PCNX2A6NKB5 2137 aa21.74■■□□□ 1.07
HMGB3-205ENST00000455596 DOCK9Q9BZ29 2069 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 CER1O95813 267 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 MT-CO1P00395 513 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 PTMSP20962 102 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 PMLP29590 882 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 DRD3P35462 400 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 GRIA4P48058 902 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 CSNK1EP49674 416 aaKnown RBP21.73■■□□□ 1.07
HMGB3-205ENST00000455596 CLCN6P51797 869 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 ADPRHP54922 357 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 ASIC2Q16515 512 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 MANEALQ5VSG8 457 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 SFMBT2Q5VUG0 894 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 DRC7Q8IY82 874 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 CCDC185Q8N715 623 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 OR14C36Q8NHC7 312 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 NTAN1Q96AB6 310 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 SYT11Q9BT88 431 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 SPON2Q9BUD6 331 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 RETREG1Q9H6L5 497 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 GAREM1Q9H706 876 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 ATP13A1Q9HD20 1204 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 SLCO1B1Q9Y6L6 691 aa21.73■■□□□ 1.07
HMGB3-205ENST00000455596 A0A1B0GVT2 93 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 A0A1W2PPC4 97 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 CBX4O00257 560 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 CCP110O43303 1012 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 CD59P13987 128 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 DESP17661 470 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 RRM1P23921 792 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 ZNF143P52747 638 aaPredicted RBP21.72■■□□□ 1.07
HMGB3-205ENST00000455596 BNC1Q01954 994 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 GNA12Q03113 381 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 NR1I3Q14994 352 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 RWDD4Q6NW29 188 aaKnown RBP21.72■■□□□ 1.07
HMGB3-205ENST00000455596 LINGO4Q6UY18 593 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.72■■□□□ 1.07
HMGB3-205ENST00000455596 SLFN11Q7Z7L1 901 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 PIP4K2CQ8TBX8 421 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 VCPIP1Q96JH7 1222 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 ORAI3Q9BRQ5 295 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 CBX8Q9HC52 389 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 AIPL1Q9NZN9 384 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 SARDHQ9UL12 918 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 PPM1HQ9ULR3 514 aa21.72■■□□□ 1.07
HMGB3-205ENST00000455596 K7ERQ8 282 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 SLC7A4O43246 635 aa21.71■■□□□ 1.07
HMGB3-205ENST00000455596 PLEKP08567 350 aaPredicted RBP21.71■■□□□ 1.07
HMGB3-205ENST00000455596 RHOQP17081 205 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms