RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 CFAP52Q8N1V2 620 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 SPEM1Q8N4L4 309 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 DCAF4L2Q8NA75 395 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 KDF1Q8NAX2 398 aaPredicted RBP8.94□□□□□ -0.98
COL28A1-205ENST00000453441 BHMTQ93088 406 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 TTC17Q96AE7 1141 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 LMLNQ96KR4 655 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 ALS2CR12Q96Q35 445 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 PEBP4Q96S96 227 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 C2orf49Q9BVC5 232 aaPredicted RBP8.94□□□□□ -0.98
COL28A1-205ENST00000453441 LACRTQ9GZZ8 138 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 RAB6CQ9H0N0 254 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 MAGEH1Q9H213 219 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 LMAN1LQ9HAT1 526 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL28A1-205ENST00000453441 ABCB8Q9NUT2 735 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 NDRG2Q9UN36 371 aaKnown RBP8.94□□□□□ -0.98
COL28A1-205ENST00000453441 ALG6Q9Y672 507 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 TRIOO75962 3097 aa8.94□□□□□ -0.98
COL28A1-205ENST00000453441 CHD5Q8TDI0 1954 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 ZSCAN5CA6NGD5 496 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 K7EQS6 105 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 RAMP2O60895 175 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 PAPSS2O95340 614 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 EGFP01133 1207 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 DLDP09622 509 aaKnown RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 ZFXP17010 805 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 IL1R2P27930 398 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 NNMTP40261 264 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 CETN2P41208 172 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 KIR2DL1P43626 348 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 CCR3P51677 355 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 CDH6P55285 790 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 SLC20A2Q08357 652 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 LMAN2Q12907 356 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 GEN1Q17RS7 908 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 ALFQ53S48 1182 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 PITRM1Q5JRX3 1037 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 ZFYVE27Q5T4F4 411 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 RNF219Q5W0B1 726 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 MBLAC2Q68D91 279 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 CXorf57Q6NSI4 855 aaKnown RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 RETSATQ6NUM9 610 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 RFX8Q6ZV50 586 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 CYP2U1Q7Z449 544 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 NLRP14Q86W24 1093 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 LRRC49Q8IUZ0 686 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 KATNAL2Q8IYT4 538 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 UMODL1-AS1Q8N2C9 162 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 KCTD6Q8NC69 237 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 TRIM58Q8NG06 486 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 USP33Q8TEY7 942 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 HSPH1Q92598 858 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 MYEOVQ96EZ4 313 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 RBM41Q96IZ5 413 aaKnown RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 INSM2Q96T92 566 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 FOXQ1Q9C009 403 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 MUC3BQ9H195 1237 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF395Q9H8N7 513 aaPredicted RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 FBRSQ9HAH7 460 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 PCDH18Q9HCL0 1135 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 ELOVL2Q9NXB9 296 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF212Q9UDV6 495 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 SLC25A13Q9UJS0 675 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 HPCAL4Q9UM19 191 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 PLA2G4CQ9UP65 541 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 SLC8A2Q9UPR5 921 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 NEU3Q9UQ49 428 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 PPP2R2CQ9Y2T4 447 aa8.93□□□□□ -0.98
COL28A1-205ENST00000453441 MYO18AQ92614 2054 aaKnown RBP8.93□□□□□ -0.98
COL28A1-205ENST00000453441 MACROD2A1Z1Q3 448 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 GRID2IPA4D2P6 1211 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FAM72CH0Y354 149 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 BUB1O43683 1085 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ZNF189O75820 626 aaPredicted RBP8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CNTN5O94779 1100 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CD72P21854 359 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CTNNA2P26232 953 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 NTSR1P30989 418 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CD70P32970 193 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CTNNA1P35221 906 aaKnown RBP8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CSKP41240 450 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ARSEP51690 589 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 TAS2R40P59535 323 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ST8SIA6P61647 398 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ECT2LQ008S8 904 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 GNA12Q03113 381 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FZD5Q13467 585 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ENPP2Q13822 863 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 DPYSQ14117 519 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 POLD3Q15054 466 aaPredicted RBP8.92□□□□□ -0.98
COL28A1-205ENST00000453441 CA9Q16790 459 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 SMTNL2Q2TAL5 461 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 KCNT1Q5JUK3 1230 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 ARTNQ5T4W7 220 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 TMCO4Q5TGY1 634 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FAM72AQ5TYM5 149 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 FAM72DQ6L9T8 149 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 TMCO3Q6UWJ1 677 aa8.92□□□□□ -0.98
COL28A1-205ENST00000453441 BZW1Q7L1Q6 419 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms