RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 CBLBQ13191 982 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 BFSP2Q13515 415 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 DLG2Q15700 870 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 ALFQ53S48 1182 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 SPANXN3Q5MJ09 141 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 RAP1GAP2Q684P5 730 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 SLC43A3Q8NBI5 491 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 ZSCAN18Q8TBC5 510 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 KLHL5Q96PQ7 755 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 VAT1Q99536 393 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 FSD1LQ9BXM9 530 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.01□□□□□ -0.49
VTA1-203ENST00000452973 FBXO6Q9NRD1 293 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 HEY2Q9UBP5 337 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 BAIAP2L1Q9UHR4 511 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 SLC12A8A0AV02 714 aa12□□□□□ -0.49
VTA1-203ENST00000452973 DCTN3O75935 186 aa12□□□□□ -0.49
VTA1-203ENST00000452973 HLA-DQB2P05538 268 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CCNCP24863 283 aa12□□□□□ -0.49
VTA1-203ENST00000452973 ZNF135P52742 658 aaPredicted RBP12□□□□□ -0.49
VTA1-203ENST00000452973 ARFIP2P53365 341 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CDH17Q12864 832 aa12□□□□□ -0.49
VTA1-203ENST00000452973 RASIP1Q5U651 963 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CES4AQ5XG92 561 aa12□□□□□ -0.49
VTA1-203ENST00000452973 NAPEPLDQ6IQ20 393 aa12□□□□□ -0.49
VTA1-203ENST00000452973 KCNMB4Q86W47 210 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CHSY1Q86X52 802 aa12□□□□□ -0.49
VTA1-203ENST00000452973 ARID3BQ8IVW6 561 aaPredicted RBP12□□□□□ -0.49
VTA1-203ENST00000452973 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
VTA1-203ENST00000452973 ATP2A3Q93084 1043 aa12□□□□□ -0.49
VTA1-203ENST00000452973 FUBP3Q96I24 572 aaKnown RBP eCLIP12□□□□□ -0.49
VTA1-203ENST00000452973 IPO11Q9UI26 975 aaKnown RBP12□□□□□ -0.49
VTA1-203ENST00000452973 ZFP69BQ9UJL9 534 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CDY1Q9Y6F8 540 aa12□□□□□ -0.49
VTA1-203ENST00000452973 NUMBLQ9Y6R0 609 aa12□□□□□ -0.49
VTA1-203ENST00000452973 NLRC5Q86WI3 1866 aa12□□□□□ -0.49
VTA1-203ENST00000452973 ZCWPW2A0A1B0GU75 182 aa12□□□□□ -0.49
VTA1-203ENST00000452973 TMEM189-UBE2V1I3L0A0 370 aa12□□□□□ -0.49
VTA1-203ENST00000452973 SYN3O14994 580 aa12□□□□□ -0.49
VTA1-203ENST00000452973 FGF10O15520 208 aaPredicted RBP12□□□□□ -0.49
VTA1-203ENST00000452973 MYL2P10916 166 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CRHR1P34998 444 aa12□□□□□ -0.49
VTA1-203ENST00000452973 ETFBP38117 255 aa12□□□□□ -0.49
VTA1-203ENST00000452973 GP5P40197 560 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CHRNA4P43681 627 aa12□□□□□ -0.49
VTA1-203ENST00000452973 VEGFBP49765 207 aa12□□□□□ -0.49
VTA1-203ENST00000452973 SEPT6Q14141 434 aa12□□□□□ -0.49
VTA1-203ENST00000452973 FAM117BQ6P1L5 589 aa12□□□□□ -0.49
VTA1-203ENST00000452973 FAM126BQ8IXS8 530 aa12□□□□□ -0.49
VTA1-203ENST00000452973 DCLK2Q8N568 766 aa12□□□□□ -0.49
VTA1-203ENST00000452973 SLC25A41Q8N5S1 370 aa12□□□□□ -0.49
VTA1-203ENST00000452973 TTC16Q8NEE8 873 aa12□□□□□ -0.49
VTA1-203ENST00000452973 SEPT8Q92599 483 aa12□□□□□ -0.49
VTA1-203ENST00000452973 TMEM120AQ9BXJ8 343 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CCSER2Q9H7U1 834 aa12□□□□□ -0.49
VTA1-203ENST00000452973 MARCH5Q9NX47 278 aa12□□□□□ -0.49
VTA1-203ENST00000452973 MARCH2Q9P0N8 246 aa12□□□□□ -0.49
VTA1-203ENST00000452973 TLR6Q9Y2C9 796 aa12□□□□□ -0.49
VTA1-203ENST00000452973 PTPRDP23468 1912 aa12□□□□□ -0.49
VTA1-203ENST00000452973 MTMR11A4FU01 709 aa12□□□□□ -0.49
VTA1-203ENST00000452973 J3KR12 359 aa12□□□□□ -0.49
VTA1-203ENST00000452973 FKTNO75072 461 aa12□□□□□ -0.49
VTA1-203ENST00000452973 SERPINB3P29508 390 aa12□□□□□ -0.49
VTA1-203ENST00000452973 CCNFP41002 786 aa12□□□□□ -0.49
VTA1-203ENST00000452973 ELF3P78545 371 aaPredicted RBP12□□□□□ -0.49
VTA1-203ENST00000452973 TMEM135Q86UB9 458 aa12□□□□□ -0.49
VTA1-203ENST00000452973 TNS4Q8IZW8 715 aa12□□□□□ -0.49
VTA1-203ENST00000452973 C8orf48Q96LL4 319 aa12□□□□□ -0.49
VTA1-203ENST00000452973 GLOD4Q9HC38 313 aa12□□□□□ -0.49
VTA1-203ENST00000452973 NT5MQ9NPB1 228 aa12□□□□□ -0.49
VTA1-203ENST00000452973 MTO1Q9Y2Z2 717 aaKnown RBP12□□□□□ -0.49
VTA1-203ENST00000452973 BPTFQ12830 3046 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 ERI2A8K979 691 aaKnown RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 MATN3O15232 486 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 KRT16P08779 473 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 FASTKD1Q53R41 847 aaKnown RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 MS4A13Q5J8X5 152 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 FSTL4Q6MZW2 842 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 BEND5Q7L4P6 421 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 RTL3Q8N8U3 475 aaKnown RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 ACVR1CQ8NER5 493 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 HMCESQ96FZ2 354 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 RPRD1AQ96P16 312 aaPredicted RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 TBL1YQ9BQ87 522 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 C20orf27Q9GZN8 174 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 IL22Q9GZX6 179 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 SNX15Q9NRS6 342 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 AAR2Q9Y312 384 aaKnown RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 MYO16Q9Y6X6 1858 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 A8MUI8 341 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 VGLL3A8MV65 326 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 ADAM12O43184 909 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 LYPLA1O75608 230 aaPredicted RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 VAPBO95292 243 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 HAPLN1P10915 354 aaPredicted RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 NQO1P15559 274 aaKnown RBP11.99□□□□□ -0.49
VTA1-203ENST00000452973 CNTFP26441 200 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 MNAT1P51948 309 aa11.99□□□□□ -0.49
VTA1-203ENST00000452973 TEDDM1Q5T9Z0 273 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms