RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 COPG1Q9Y678 874 aaKnown RBP2.47□□□□□ -2.01
LRCH3-209ENST00000452660 EID1Q9Y6B2 187 aa2.47□□□□□ -2.01
LRCH3-209ENST00000452660 POM121BA6NF01 834 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 EYA2O00167 538 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 APOL1O14791 398 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 RNMTO43148 476 aaKnown RBP2.46□□□□□ -2.02
LRCH3-209ENST00000452660 TSPAN6O43657 245 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 LDB2O43679 373 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 ANXA6P08133 673 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 PRKCHP24723 683 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 GRK5P34947 590 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 TRAF3Q13114 568 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 PKP1Q13835 747 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 HNF4GQ14541 408 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 ARL13BQ3SXY8 428 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 PLEKHA7Q6IQ23 1121 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 TMEM71Q6P5X7 295 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 ANKS1BQ7Z6G8 1248 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 PATL1Q86TB9 770 aaKnown RBP2.46□□□□□ -2.02
LRCH3-209ENST00000452660 DPP9Q86TI2 863 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 FJX1Q86VR8 437 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 NRSN1Q8IZ57 195 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 LMNTD1Q8N9Z9 388 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 REXO5Q96IC2 774 aaKnown RBP2.46□□□□□ -2.02
LRCH3-209ENST00000452660 DUX3Q96PT4 197 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 NODALQ96S42 347 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 OSBPL5Q9H0X9 879 aaPredicted RBP2.46□□□□□ -2.02
LRCH3-209ENST00000452660 GAREM1Q9H706 876 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 TCEAL9Q9UHQ7 104 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 CORO2BQ9UQ03 480 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 MAN2B2Q9Y2E5 1009 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 PKP3Q9Y446 797 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 PCDHGB6Q9Y5F9 930 aa2.46□□□□□ -2.02
LRCH3-209ENST00000452660 MST1RQ04912 1400 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 SNED1Q8TER0 1413 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 IGLV5-37A0A075B6J1 123 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 MAGEA13PA6NCF6 341 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 SERPINI2O75830 405 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 TMCC1O94876 653 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 LARGE1O95461 756 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 STT3AP46977 705 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 PEX5P50542 639 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 PMS2P54278 862 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 ADORA2A-AS1P86434 159 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 ACSM2AQ08AH3 577 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 TROAPQ12815 778 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 SNTA1Q13424 505 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 ZNF284Q2VY69 593 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 PLEKHG6Q3KR16 790 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 KRT71Q3SY84 523 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 TBRG1Q3YBR2 411 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 TRIM60Q495X7 471 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 C5orf22Q49AR2 442 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 MON1BQ7L1V2 547 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 CCDC25Q86WR0 208 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 PALB2Q86YC2 1186 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 CCDC33Q8N5R6 958 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 LILRB1Q8NHL6 650 aaPredicted RBP2.45□□□□□ -2.02
LRCH3-209ENST00000452660 TMED6Q8WW62 240 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 IP6K1Q92551 441 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 BICD1Q96G01 975 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 APOLD1Q96LR9 279 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 ZNF385AQ96PM9 386 aaKnown RBP2.45□□□□□ -2.02
LRCH3-209ENST00000452660 UHRF2Q96PU4 802 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 POLDIP3Q9BY77 421 aaKnown RBP2.45□□□□□ -2.02
LRCH3-209ENST00000452660 FRMD8Q9BZ67 464 aaPredicted RBP2.45□□□□□ -2.02
LRCH3-209ENST00000452660 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.45□□□□□ -2.024e-12■□□□□ 9.8
LRCH3-209ENST00000452660 HIPK3Q9H422 1215 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 SEL1LQ9UBV2 794 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 SLC12A4Q9UP95 1085 aa2.45□□□□□ -2.02
LRCH3-209ENST00000452660 FAM234BA2RU67 622 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 PCDH17O14917 1159 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 FGF18O76093 207 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 NDST3O95803 873 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 CER1O95813 267 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 CYP2J2P51589 502 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 CDH12P55289 794 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 BNC1Q01954 994 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 IFIT5Q13325 482 aaKnown RBP2.44□□□□□ -2.02
LRCH3-209ENST00000452660 ZACNQ401N2 412 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 ACCSLQ4AC99 568 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 KLHDC7AQ5VTJ3 777 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 FAM171A1Q5VUB5 890 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 ANKRD40Q6AI12 368 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 ZNF449Q6P9G9 518 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 C11orf96Q7Z7L8 435 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 TMC8Q8IU68 726 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 WDSUB1Q8N9V3 476 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 ADGRG7Q96K78 797 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 IL17FQ96PD4 163 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 GFM1Q96RP9 751 aaKnown RBP2.44□□□□□ -2.02
LRCH3-209ENST00000452660 C1QTNF5Q9BXJ0 243 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 TMEM120AQ9BXJ8 343 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 TP63Q9H3D4 680 aaPredicted RBP2.44□□□□□ -2.02
LRCH3-209ENST00000452660 OSGIN2Q9Y236 505 aa2.44□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3DA0A087WVF3 549 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3IA0A087WXS9 549 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3EA0A087X179 549 aa2.43□□□□□ -2.02
LRCH3-209ENST00000452660 TBC1D3KA0A087X1G2 549 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms