RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 TMEM51Q9NW97 253 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 BEX4Q9NWD9 120 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 UBAP1Q9NZ09 502 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 HSPBP1Q9NZL4 362 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 MARCH2Q9P0N8 246 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 SLC25A10Q9UBX3 287 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 BAG5Q9UL15 447 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 CHTOPQ9Y3Y2 248 aaKnown RBP4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 ASB3Q9Y575 518 aa4.59□□□□□ -1.67
HMGB3P21-201ENST00000452483 MYBBP1AQ9BQG0 1328 aaKnown RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCDC187A0A096LP49 1063 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PNMA6EA0A0J9YXQ4 647 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 BTBD18B2RXH4 712 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 C22orf46C9J442 243 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 NPIPB6E9PJ23 425 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 FAM86B1E9PN63 330 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ABLIM1O14639 778 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC27A2O14975 620 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SYN3O14994 580 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CYTIPO60759 359 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 AKR7A3O95154 331 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 LY86O95711 162 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PLGP00747 810 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PENKP01210 267 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 HMGCRP04035 888 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 S100A9P06702 114 aaKnown RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MMP2P08253 660 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCDC192P0DO97 292 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MST1P26927 711 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RPA1P27694 616 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 TNFRSF8P28908 595 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ECHS1P30084 290 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 VIPR1P32241 457 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 TTKP33981 857 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RFC4P35249 363 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 HSD17B2P37059 387 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC6A9P48067 706 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 DHPSP49366 369 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RGS3P49796 1198 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 EPHB4P54760 987 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MFAP4P55083 255 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 EIF3BP55884 814 aaKnown RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 LINC00310P59036 64 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 YWHAZP63104 245 aaKnown RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 YBX1P67809 324 aaKnown RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 POU6F2P78424 691 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SRSF3P84103 164 aaKnown RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ARHGAP8P85298 464 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MVKQ03426 396 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RELQ04864 619 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PRKCZQ05513 592 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 TMEM62Q0P6H9 643 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 TRDNQ13061 729 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 TUBB3Q13509 450 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CBFBQ13951 182 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 NOLC1Q14978 699 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RAB3GAP1Q15042 981 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 STK11Q15831 433 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 KCNA10Q16322 511 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 DGKDQ16760 1214 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 HYAL4Q2M3T9 481 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCDC57Q2TAC2 916 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 LETM2Q2VYF4 491 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 KRT71Q3SY84 523 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PLEKHN1Q494U1 663 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 KCTD21Q4G0X4 260 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 AMOTQ4VCS5 1084 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCDC178Q5BJE1 867 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CBWD5Q5RIA9 395 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SHEQ5VZ18 495 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PLAG1Q6DJT9 500 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 HEPHL1Q6MZM0 1159 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SARM1Q6SZW1 724 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MFSD7Q6UXD7 560 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RPTNQ6XPR3 784 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 FAM83AQ86UY5 434 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RFX6Q8HWS3 928 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 LRRC56Q8IYG6 542 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 FAM185AQ8N0U4 392 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZNF366Q8N895 744 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 IQUBQ8NA54 791 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 IL17RCQ8NAC3 791 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CORO2AQ92828 525 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SPACA9Q96E40 222 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 ELP4Q96EB1 424 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 SGF29Q96ES7 293 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 DTNBP1Q96EV8 351 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 EPSTI1Q96J88 318 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RMDN2Q96LZ7 410 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 CFAP57Q96MR6 1250 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MED15Q96RN5 788 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 UHRF1Q96T88 793 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 FOXB1Q99853 325 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 PIMREGQ9BSJ6 248 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 THUMPD2Q9BTF0 503 aaKnown RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 WDR11Q9BZH6 1224 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 MS4A7Q9GZW8 240 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 WNT5BQ9H1J7 359 aa4.58□□□□□ -1.68
HMGB3P21-201ENST00000452483 RIBC2Q9H4K1 309 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms