RNA–Protein interactions for RNA: ENST00000452140.5

VPS8-211, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 392 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-211ENST00000452140 STRNO43815 780 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 HBP1O60381 514 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 TUBB4AP04350 444 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 KLRC2P26717 231 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CIITAP33076 1130 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CPA2P48052 419 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CYP2J2P51589 502 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 SLC12A2P55011 1212 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CASP6P55212 293 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 GEMIN4P57678 1058 aaKnown RBP4.32□□□□□ -1.72
VPS8-211ENST00000452140 INHBEP58166 350 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 NHLH1Q02575 133 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CFHR1Q03591 330 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 STIM1Q13586 685 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 SIM2Q14190 667 aaPredicted RBP4.32□□□□□ -1.72
VPS8-211ENST00000452140 SLC9C1Q4G0N8 1177 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 EARS2Q5JPH6 523 aaKnown RBP4.32□□□□□ -1.72
VPS8-211ENST00000452140 FAM69AQ5T7M9 428 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 GJB7Q6PEY0 223 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 SLC2A7Q6PXP3 512 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CYB5R4Q7L1T6 521 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 PTF1AQ7RTS3 328 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 YTHDF3Q7Z739 585 aaKnown RBP4.32□□□□□ -1.72
VPS8-211ENST00000452140 CHD1LQ86WJ1 897 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 PRIMA1Q86XR5 153 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 GHDCQ8N2G8 530 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 GALNT16Q8N428 558 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 SETD9Q8NE22 299 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 RAB40AQ8WXH6 277 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CNOT9Q92600 299 aaKnown RBP4.32□□□□□ -1.72
VPS8-211ENST00000452140 NELL1Q92832 810 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 SKA1Q96BD8 255 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CD180Q99467 661 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 FAM118BQ9BPY3 351 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 PIMREGQ9BSJ6 248 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 FUZQ9BT04 418 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 NPLQ9BXD5 320 aaPredicted RBP4.32□□□□□ -1.72
VPS8-211ENST00000452140 INTS2Q9H0H0 1204 aaKnown RBP4.32□□□□□ -1.72
VPS8-211ENST00000452140 SLC25A18Q9H1K4 315 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CXorf56Q9H5V9 222 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 EPHX3Q9H6B9 360 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 TMEM184CQ9NVA4 438 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 NLKQ9UBE8 527 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CAMK2AQ9UQM7 478 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 TMEM98Q9Y2Y6 226 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 CYP46A1Q9Y6A2 500 aa4.32□□□□□ -1.72
VPS8-211ENST00000452140 RHODO00212 210 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 TP73O15350 636 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 GUCY1B2O75343 617 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 TULP3O75386 442 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 NEURL1O76050 574 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 WNT1P04628 370 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 CD63P08962 238 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 CYP19A1P11511 503 aaPredicted RBP4.31□□□□□ -1.72
VPS8-211ENST00000452140 ATP5F1P24539 256 aaPredicted RBP4.31□□□□□ -1.72
VPS8-211ENST00000452140 GJC1P36383 396 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 PAFAH1B1P43034 410 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 CDH15P55291 814 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 HSF1Q00613 529 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 GHRHRQ02643 423 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 ZNF91Q05481 1191 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 SLC18A3Q16572 532 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 C5orf22Q49AR2 442 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 ZNF667Q5HYK9 610 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 SLC18B1Q6NT16 456 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 ZNF793Q6ZN11 406 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 H1FNTQ75WM6 255 aaPredicted RBP4.31□□□□□ -1.72
VPS8-211ENST00000452140 PPHLN1Q8NEY8 458 aaKnown RBP4.31□□□□□ -1.72
VPS8-211ENST00000452140 EME1Q96AY2 570 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 KIF1BPQ96EK5 621 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 IFT27Q9BW83 186 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS8-211ENST00000452140 UNC45AQ9H3U1 944 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 JMJD4Q9H9V9 463 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 IRAK4Q9NWZ3 460 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 ZDHHC7Q9NXF8 308 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 ICKQ9UPZ9 632 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 DHDHQ9UQ10 334 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 CNPY2Q9Y2B0 182 aa4.31□□□□□ -1.72
VPS8-211ENST00000452140 DPPA5A6NC42 116 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 KCNU1A8MYU2 1149 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 B4E171 279 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 CEP104O60308 925 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 BCAR3O75815 825 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 DDAH2O95865 285 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 ADAP00813 363 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 URODP06132 367 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 HOXD9P28356 352 aaPredicted RBP4.3□□□□□ -1.72
VPS8-211ENST00000452140 CHRNA5P30532 468 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 DDIT3P35638 169 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 TSPAN7P41732 249 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 STAT1P42224 750 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 BAK1Q16611 211 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 ZNF766Q5HY98 468 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 PAPD7Q5XG87 772 aaKnown RBP4.3□□□□□ -1.72
VPS8-211ENST00000452140 FAAH2Q6GMR7 532 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 FAM57BQ71RH2 274 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 B4GALNT4Q76KP1 1039 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 NEK8Q86SG6 692 aa4.3□□□□□ -1.72
VPS8-211ENST00000452140 DDIASQ8IXT1 998 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms