RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 PRPF39Q86UA1 669 aaKnown RBP17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 FAM71AQ8IYT1 594 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 GALNT15Q8N3T1 639 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 ZNF397Q8NF99 534 aaPredicted RBP17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 TUBGCP2Q9BSJ2 902 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 TKTL2Q9H0I9 626 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 MUC3BQ9H195 1237 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 NDST4Q9H3R1 872 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 SAMSN1Q9NSI8 373 aaKnown RBP17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 PIGVQ9NUD9 493 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.03■□□□□ 0.321e-8■■□□□ 11.9
RAB11FIP3-204ENST00000449879 PPM1HQ9ULR3 514 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 TPX2Q9ULW0 747 aaKnown RBP17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 OR51B4Q9Y5P0 310 aa17.03■□□□□ 0.32
RAB11FIP3-204ENST00000449879 TP53BP1Q12888 1972 aaPredicted RBP17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 TRABD2BA6NFA1 517 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 PES1O00541 588 aaKnown RBP17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 MCF2LO15068 1137 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 LATO43561 262 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 ADCY5O95622 1261 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 SULT1E1P49888 294 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 VASPP50552 380 aaPredicted RBP17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 CDH4P55283 916 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 MYL5Q02045 173 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 CNTN1Q12860 1018 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 RAPGEF1Q13905 1077 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 DRAP1Q14919 205 aaPredicted RBP17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 SHBQ15464 509 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 VWA3BQ502W6 1294 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 ZDHHC17Q8IUH5 632 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 SH2D3CQ8N5H7 860 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 TMEM35BQ8NCS4 154 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 PIP4K2CQ8TBX8 421 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 SAP25Q8TEE9 199 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 NPY6RQ99463 290 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 ANLNQ9NQW6 1124 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 RRN3Q9NYV6 651 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 STAP1Q9ULZ2 295 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 TBC1D30Q9Y2I9 924 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 SNX10Q9Y5X0 201 aa17.02■□□□□ 0.32
RAB11FIP3-204ENST00000449879 FREM2Q5SZK8 3169 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ATRXP46100 2492 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 C1QTNF3-AMACRE9PGA6 284 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 CBX4O00257 560 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 SLC7A4O43246 635 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 PLRG1O43660 514 aaKnown RBP17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 LDOC1O95751 146 aaPredicted RBP17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 MT-CO1P00395 513 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ARRB1P49407 418 aaPredicted RBP17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 CXCR3P49682 368 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 NXPH1P58417 271 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 KRT83P78385 493 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 DEUP1Q05D60 604 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 BNIP3Q12983 259 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 C5orf22Q49AR2 442 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ALFQ53S48 1182 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 TCP11X2Q5H9J9 407 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 MIIPQ5JXC2 388 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 OTUD1Q5VV17 481 aaPredicted RBP17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 CDKAL1Q5VV42 579 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 SMYD5Q6GMV2 418 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 NAPEPLDQ6IQ20 393 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 DPY19L2P1Q6NXN4 242 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 EID2Q8N6I1 236 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 C18orf8Q96DM3 657 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 CNDP2Q96KP4 475 aaKnown RBP17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 KDM4CQ9H3R0 1056 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ARHGEF38Q9NXL2 777 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ARHGAP20Q9P2F6 1191 aa17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 NYNRINQ9P2P1 1898 aaKnown RBP17.01■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ARID1BQ8NFD5 2236 aaPredicted RBP17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 I6L893 689 aaPredicted RBP17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ENC1O14682 589 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ALOX15BO15296 676 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 SNAP91O60641 907 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 F9P00740 461 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 RHOCP08134 193 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 SRCP12931 536 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 HOXB3P14651 431 aaPredicted RBP17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 CYP11B1P15538 503 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 CYP4F3Q08477 520 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 KCNMA1Q12791 1236 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 DNAJC3Q13217 504 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 STAT4Q14765 748 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 SMAD1Q15797 465 aaKnown RBP17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 C2CD6Q53TS8 623 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 BRMS1LQ5PSV4 323 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 FAM102AQ5T9C2 384 aaPredicted RBP17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 AGBL4Q5VU57 503 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 TAF3Q5VWG9 929 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 LRRC31Q6UY01 552 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ERICH1Q86X53 443 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 MFSD2AQ8NA29 543 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 ATP11CQ8NB49 1132 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 FAM131CQ96AQ9 280 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 TBCBQ99426 244 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 C2orf49Q9BVC5 232 aaPredicted RBP17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 NAT10Q9H0A0 1025 aaKnown RBP17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 TMPRSS4Q9NRS4 437 aa17■□□□□ 0.31
RAB11FIP3-204ENST00000449879 MPP6Q9NZW5 540 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms