RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ETS1P14921 441 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 GLDCP23378 1020 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 HLA-FP30511 346 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 ETFBP38117 255 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 PTGIRP43119 386 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 CLCN6P51797 869 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 OXCT1P55809 520 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 SLC7A5Q01650 507 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 SERINC3Q13530 473 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 RUNX3Q13761 415 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 ZNF783Q6ZMS7 281 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 LEKR1Q6ZMV7 388 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 MAATS1Q7Z4T9 603 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 C12orf40Q86WS4 652 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 GLIS1Q8NBF1 620 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 XPO6Q96QU8 1125 aaKnown RBP14.96□□□□□ -0.01
TNF-208ENST00000449264 HINFPQ9BQA5 517 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 FERMT1Q9BQL6 677 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 BRD8Q9H0E9 1235 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 KCNK12Q9HB15 430 aa14.96□□□□□ -0.01
TNF-208ENST00000449264 DNAJC17Q9NVM6 304 aaKnown RBP14.96□□□□□ -0.01
TNF-208ENST00000449264 KIAA1522Q9P206 1035 aaPredicted RBP14.96□□□□□ -0.01
TNF-208ENST00000449264 FEZ2Q9UHY8 353 aaPredicted RBP14.96□□□□□ -0.01
TNF-208ENST00000449264 RNF103O00237 685 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 TRIM24O15164 1050 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 CACNG3O60359 315 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 KRT14P02533 472 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 ASGR2P07307 311 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 ZSCAN5DPP0CG00 497 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 NR1H3Q13133 447 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 PUS10Q3MIT2 529 aaKnown RBP14.95□□□□□ -0.02
TNF-208ENST00000449264 ASTLQ6HA08 431 aaPredicted RBP14.95□□□□□ -0.02
TNF-208ENST00000449264 TIGD7Q6NT04 549 aaPredicted RBP14.95□□□□□ -0.02
TNF-208ENST00000449264 APCDD1Q8J025 514 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 USP33Q8TEY7 942 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 UBXN4Q92575 508 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 FEM1AQ9BSK4 669 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 TRIM31Q9BZY9 425 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 USP29Q9HBJ7 922 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 ASIC3Q9UHC3 531 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 HPCAL4Q9UM19 191 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 TTLL3Q9Y4R7 772 aa14.95□□□□□ -0.02
TNF-208ENST00000449264 SNAP91O60641 907 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 STK10O94804 968 aaKnown RBP14.94□□□□□ -0.02
TNF-208ENST00000449264 HEXIM1O94992 359 aaKnown RBP14.94□□□□□ -0.02
TNF-208ENST00000449264 CCNCP24863 283 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 TERF1P54274 439 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 KDSRQ06136 332 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 ZBTB17Q13105 803 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 PLEKHG6Q3KR16 790 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 LRRC49Q8IUZ0 686 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 TAB3Q8N5C8 712 aaPredicted RBP14.94□□□□□ -0.02
TNF-208ENST00000449264 ZNF557Q8N988 423 aaPredicted RBP14.94□□□□□ -0.02
TNF-208ENST00000449264 CCDC110Q8TBZ0 833 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 SLCO2A1Q92959 643 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 TSGA13Q96PP4 275 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 EPC1Q9H2F5 836 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 GGA2Q9UJY4 613 aa14.94□□□□□ -0.02
TNF-208ENST00000449264 FAM187AA6NFU0 413 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 ZSCAN5CA6NGD5 496 aaPredicted RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 ARNTLO00327 626 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 KDELR3O43731 214 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 PRAMEF11O60813 436 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 TULP3O75386 442 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 NEBLO76041 1014 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 PABPC1P11940 636 aaKnown RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 PTPN3P26045 913 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 STIP1P31948 543 aaKnown RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 ACTN2P35609 894 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 DGKGP49619 791 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 IL10RBQ08334 325 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 PTK6Q13882 451 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 ERCC6LQ2NKX8 1250 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 GAB4Q2WGN9 574 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 ITPRIPL2Q3MIP1 535 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 FUT11Q495W5 492 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 PITRM1Q5JRX3 1037 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 LINGO4Q6UY18 593 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 DCAF4L2Q8NA75 395 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 CSGALNACT1Q8TDX6 532 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 NSMCE1Q8WV22 266 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 C2orf49Q9BVC5 232 aaPredicted RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 ACE2Q9BYF1 805 aaPredicted RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 PCDH9Q9HC56 1237 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 KLHL8Q9P2G9 620 aaPredicted RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 THEGQ9P2T0 379 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 VPS51Q9UID3 782 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 OR51B4Q9Y5P0 310 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 ACTL7AQ9Y615 435 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 F5H423 210 aaPredicted RBP14.93□□□□□ -0.02
TNF-208ENST00000449264 MATN3O15232 486 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 MTSS1O43312 755 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 JCHAINP01591 159 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 CCNB1P14635 433 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 GJA4P35212 333 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 SLC6A11P48066 632 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 SOX9P48436 509 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 ARF5P84085 180 aa14.93□□□□□ -0.02
TNF-208ENST00000449264 ZNF33AQ06730 810 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms