RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 CAMK2GQ13555 558 aaPredicted RBP14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 HNRNPA1L2Q32P51 320 aaKnown RBP14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 ODF2Q5BJF6 829 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 PRR23BQ6ZRT6 265 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 TMEM139Q8IV31 216 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 MAP7D3Q8IWC1 876 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 KCTD6Q8NC69 237 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 ACRBPQ8NEB7 543 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 CCDC112Q8NEF3 446 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 GAB3Q8WWW8 586 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 PRCCQ92733 491 aaPredicted RBP14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 ARHGEF2Q92974 986 aaKnown RBP14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 SIPA1Q96FS4 1042 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 MYO19Q96H55 970 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 CALR3Q96L12 384 aaKnown RBP14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 PRDM16Q9HAZ2 1276 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 PRSS16Q9NQE7 514 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 NDFIP2Q9NV92 336 aa14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 CWC15Q9P013 229 aaKnown RBP14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 MYO18AQ92614 2054 aaKnown RBP14.35□□□□□ -0.11
GTF3C3-206ENST00000448539 TARSL2A2RTX5 802 aaKnown RBP14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 HRO43593 1189 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 SPOPO43791 374 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 ZNF217O75362 1048 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 ERCC2P18074 760 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 ACVRL1P37023 503 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 VAV2P52735 878 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 GEMIN4P57678 1058 aaKnown RBP14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 SLC20A2Q08357 652 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 SRSF5Q13243 272 aaKnown RBP14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 SIM2Q14190 667 aaPredicted RBP14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 DLG2Q15700 870 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 PARP15Q460N3 678 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 TXNRD3NBQ6F5E7 133 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 C11orf74Q86VG3 221 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 TMPRSS6Q8IU80 811 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 UMODL1-AS1Q8N2C9 162 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 SH2D3CQ8N5H7 860 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 MRGPRX1Q96LB2 322 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 CCDC114Q96M63 670 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 ACE2Q9BYF1 805 aaPredicted RBP14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 PCDH18Q9HCL0 1135 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 HS3ST2Q9Y278 367 aa14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 FARP1Q9Y4F1 1045 aaPredicted RBP14.34□□□□□ -0.11
GTF3C3-206ENST00000448539 ARHGAP42A6NI28 874 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 RASA4BC9J798 803 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 MAP3K13O43283 966 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 RASA4O43374 803 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 KDELR3O43731 214 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 ATP9BO43861 1147 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 BNIP3LO60238 219 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 SIN3BO75182 1162 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 GLDCP23378 1020 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 RECQLP46063 649 aaPredicted RBP14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 CLCN6P51797 869 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 NDST2P52849 883 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 HADHBP55084 474 aaKnown RBP14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 TAS2R40P59535 323 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 PDK2Q15119 407 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 ZNF776Q68DI1 518 aaPredicted RBP14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 TMCO3Q6UWJ1 677 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 POLNQ7Z5Q5 900 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 CPNE8Q86YQ8 564 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 LZTR1Q8N653 840 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 RLN3Q8WXF3 142 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 CSPG4P5Q96PW8 444 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 CALN1Q9BXU9 219 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 MKRN2Q9H000 416 aaKnown RBP14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 SLC6A17Q9H1V8 727 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 EPC1Q9H2F5 836 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 MTG2Q9H4K7 406 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 CD248Q9HCU0 757 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 RCOR3Q9P2K3 495 aaPredicted RBP14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 TFR2Q9UP52 801 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 INVSQ9Y283 1065 aa14.33□□□□□ -0.12
GTF3C3-206ENST00000448539 CXorf51AA0A1B0GTR3 108 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 ZSCAN5CA6NGD5 496 aaPredicted RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 BTNL10A8MVZ5 291 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 ARHGAP6O43182 974 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 BUB1O43683 1085 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 BUB1BO60566 1050 aaPredicted RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 MT-CO1P00395 513 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 LMNAP02545 664 aaKnown RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 DNTTP04053 509 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 SRCP12931 536 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 TNNT1P13805 278 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 COMTP21964 271 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 AMPD1P23109 780 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 SERPINH1P50454 418 aaKnown RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 DNA2P51530 1060 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 COPAP53621 1224 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 ZBTB16Q05516 673 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 KIF5AQ12840 1032 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 SFSWAPQ12872 951 aaKnown RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 SERINC3Q13530 473 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 DPYSQ14117 519 aa14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 ELAVL3Q14576 367 aaKnown RBP14.32□□□□□ -0.12
GTF3C3-206ENST00000448539 ELF2Q15723 593 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms