RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 SH3YL1Q96HL8 342 aaPredicted RBP19.54■□□□□ 0.72
HMGA1-205ENST00000447654 RNF146Q9NTX7 359 aa19.54■□□□□ 0.72
HMGA1-205ENST00000447654 SSC5DA1L4H1 1573 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 TESPA1A2RU30 521 aaPredicted RBP19.53■□□□□ 0.72
HMGA1-205ENST00000447654 CHADO15335 359 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 SCO2O43819 266 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 PEX10O60683 326 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 GUCY1B2O75343 617 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 BMP2P12643 396 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 YWHABP31946 246 aaKnown RBP19.53■□□□□ 0.72
HMGA1-205ENST00000447654 ABCE1P61221 599 aaKnown RBP19.53■□□□□ 0.72
HMGA1-205ENST00000447654 CDC20Q12834 499 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 PEX6Q13608 980 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 ZBTB49Q6ZSB9 765 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 ZC3H7AQ8IWR0 971 aaKnown RBP19.53■□□□□ 0.72
HMGA1-205ENST00000447654 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.53■□□□□ 0.72
HMGA1-205ENST00000447654 FNIP1Q8TF40 1166 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 RASSF5Q8WWW0 418 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 LRRC39Q96DD0 335 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 CPNE5Q9HCH3 593 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 TMEM8AQ9HCN3 771 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 GDAP2Q9NXN4 497 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 ZNF214Q9UL59 606 aaPredicted RBP19.53■□□□□ 0.72
HMGA1-205ENST00000447654 ANGPTL3Q9Y5C1 460 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 LTBP3Q9NS15 1303 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 PHIPQ8WWQ0 1821 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 TCRBV7S3A2A0A539 114 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 K7ENM7 598 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 RGS20O76081 388 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 UGT2B4P06133 528 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 HK2P52789 917 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 INTS11Q5TA45 600 aaKnown RBP19.53■□□□□ 0.72
HMGA1-205ENST00000447654 CPA5Q8WXQ8 436 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 RAD21L1Q9H4I0 556 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 PCIF1Q9H4Z3 704 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 WDR41Q9HAD4 459 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 PNPOQ9NVS9 261 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 ARMC1Q9NVT9 282 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 PCDHGA11Q9Y5H2 935 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 LOXHD1Q8IVV2 1947 aa19.53■□□□□ 0.72
HMGA1-205ENST00000447654 NELFEP18615 380 aaKnown RBP19.52■□□□□ 0.72
HMGA1-205ENST00000447654 PRKG1Q13976 671 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 TMEM132BQ14DG7 1078 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 INSCQ1MX18 579 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 ZFYVE27Q5T4F4 411 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 ARHGEF16Q5VV41 709 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 PRR23CQ6ZRP0 262 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 GALNT13Q8IUC8 556 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 CHAC2Q8WUX2 184 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 SEMA4DQ92854 862 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 NRBF2Q96F24 287 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 ACCSQ96QU6 501 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 HERC2P3Q9BVR0 1158 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 TRPV6Q9H1D0 765 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 MARCH7Q9H992 704 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 EFCAB1Q9HAE3 211 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 ZFYVE28Q9HCC9 887 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 IVNS1ABPQ9Y6Y0 642 aa19.52■□□□□ 0.72
HMGA1-205ENST00000447654 POLR2AP24928 1970 aaKnown RBP19.52■□□□□ 0.71
HMGA1-205ENST00000447654 PLOD2O00469 737 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 ACOX3O15254 700 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 UBL4AP11441 157 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 NCAM1P13591 858 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 ENPEPQ07075 957 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 DPYSL3Q14195 570 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 ARHGEF6Q15052 776 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 PLEKHG7Q6ZR37 379 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 POLNQ7Z5Q5 900 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 AKAP14Q86UN6 197 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 SNX32Q86XE0 403 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 CNTD1Q8N815 330 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 VMP1Q96GC9 406 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 SLC29A1Q99808 456 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 CBWD1Q9BRT8 395 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 DCDC2Q9UHG0 476 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 RABL2BQ9UNT1 228 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 TCAF1Q9Y4C2 921 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 DOCK5Q9H7D0 1870 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 LRRIQ4A6NIV6 560 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 PLIN3O60664 434 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 IDUAP35475 653 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 KCNJ11Q14654 390 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 BBS12Q6ZW61 710 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 CAMK1DQ8IU85 385 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 CCDC60Q8IWA6 550 aaPredicted RBP19.51■□□□□ 0.71
HMGA1-205ENST00000447654 FBXL13Q8NEE6 735 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 ZC3H15Q8WU90 426 aaKnown RBP19.51■□□□□ 0.71
HMGA1-205ENST00000447654 KLRG1Q96E93 195 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 FAR2Q96K12 515 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 MMP19Q99542 508 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 AKIP1Q9NQ31 210 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 TBC1D22BQ9NU19 505 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 GGA3Q9NZ52 723 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 HSPBP1Q9NZL4 362 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 PCDHB12Q9Y5F1 795 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 KIAA1217Q5T5P2 1943 aa19.51■□□□□ 0.71
HMGA1-205ENST00000447654 GOLGA8QA0A0J9YX86 632 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 GOLGA8OA6NCC3 632 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 GOLGA8NF8WBI6 632 aa19.5■□□□□ 0.71
HMGA1-205ENST00000447654 PAPSS1O43252 624 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms