RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SNX7Q9UNH6 387 aa8□□□□□ -1.13
SMG1-202ENST00000446231 RFX4Q33E94 735 aa8□□□□□ -1.13
SMG1-202ENST00000446231 MAF1Q9H063 256 aa8□□□□□ -1.13
SMG1-202ENST00000446231 ZNF302Q9NR11 478 aa8□□□□□ -1.13
SMG1-202ENST00000446231 AP3M1Q9Y2T2 418 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PPME1Q9Y570 386 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PCDHGA10Q9Y5H3 936 aa8□□□□□ -1.13
SMG1-202ENST00000446231 IQGAP3Q86VI3 1631 aa8□□□□□ -1.13
SMG1-202ENST00000446231 SEMA3DO95025 777 aa8□□□□□ -1.13
SMG1-202ENST00000446231 ANKRD22Q5VYY1 191 aa8□□□□□ -1.13
SMG1-202ENST00000446231 PHC3Q8NDX5 983 aa8□□□□□ -1.13
SMG1-202ENST00000446231 UBA3Q8TBC4 463 aa8□□□□□ -1.13
SMG1-202ENST00000446231 HELQQ8TDG4 1101 aa8□□□□□ -1.13
SMG1-202ENST00000446231 C7orf43Q8WVR3 580 aa8□□□□□ -1.13
SMG1-202ENST00000446231 ZNF696Q9H7X3 374 aa8□□□□□ -1.13
SMG1-202ENST00000446231 NRP2O60462 931 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 IL6P05231 212 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 MSH3P20585 1137 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 EPHA3P29320 983 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TAF12Q16514 161 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 ZNF568Q3ZCX4 644 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 C5orf22Q49AR2 442 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 OGFOD2Q6N063 350 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 UBR7Q8N806 425 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 HEPHQ9BQS7 1158 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 MAPRE3Q9UPY8 281 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 CACNA1FO60840 1977 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TPH1P17752 444 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PPP4CP60510 307 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SYNCRIPO60506 623 aaKnown RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 ATP5F1P24539 256 aaPredicted RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 POU1F1P28069 291 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TAS2R40P59535 323 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 EML3Q32P44 896 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 RNASEH2BQ5TBB1 312 aaKnown RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 PLA2G4FQ68DD2 849 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 ARMCX2Q7L311 632 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PTPN7P35236 360 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 INSCQ1MX18 579 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 CISHQ9NSE2 258 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 BTG4Q9NY30 223 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TYW5A2RUC4 315 aaKnown RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 SPDYE2BA6NHP3 402 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SPDYE6P0CI01 402 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 ACLYP53396 1101 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TMEM132DQ14C87 1099 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SPANXN3Q5MJ09 141 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SPPL2CQ8IUH8 684 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 CLEC10AQ8IUN9 316 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 ALDH16A1Q8IZ83 802 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 ELOVL6Q9H5J4 265 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 CD274Q9NZQ7 290 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PIPSLA2A3N6 862 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 XRCC1P18887 633 aaPredicted RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 MAGP20916 626 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 GRK3P35626 688 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TALDO1P37837 337 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PRR23CQ6ZRP0 262 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 C1orf186Q6ZWK4 172 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 H0YC42 278 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TRUB2O95900 331 aaKnown RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 MAPTP10636 758 aaKnown RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 SREBF1P36956 1147 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 NCF4Q15080 339 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 NECAB2Q7Z6G3 386 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SEMA4DQ92854 862 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PHF21BQ96EK2 531 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SH2D3AQ9BRG2 576 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SLC22A2O15244 555 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PABPC1P11940 636 aaKnown RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 ENPEPQ07075 957 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 RUNDC3AQ59EK9 446 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 RIOX1Q9H6W3 641 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PMF1-BGLAPU3KQ54 211 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 K7EPI3 171 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TSPAN19P0C672 248 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 ATF4P18848 351 aaPredicted RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 PPP3CAQ08209 521 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 FAM45BPQ6NSW5 357 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PPP4R4Q6NUP7 873 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 OTULINQ96BN8 352 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 CCDC154A6NI56 674 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 NPY2RP49146 381 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 UGT2A3Q6UWM9 527 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 UNC93B1Q9H1C4 597 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 ADAM7Q9H2U9 754 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 FAM172BPA6NC97 362 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 KLRK1P26718 216 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SLC9A4Q6AI14 798 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 DUSP12Q9UNI6 340 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SPTBN2O15020 2390 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 SLC18A2Q05940 514 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 C12orf43Q96C57 262 aaKnown RBP7.99□□□□□ -1.13
SMG1-202ENST00000446231 NLRP4Q96MN2 994 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 PMPCBO75439 489 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 CDK18Q07002 472 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 TNK2Q07912 1038 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 ATP6AP1LQ52LC2 224 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 HTR3CQ8WXA8 447 aa7.99□□□□□ -1.13
SMG1-202ENST00000446231 UNKQ9C0B0 810 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms