RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CNTN5O94779 1100 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 TFRCP02786 760 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 ENO1P06733 434 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 CELA2AP08217 269 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 HOXA7P31268 230 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 PSMC2P35998 433 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 RBM5P52756 815 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 C21orf58P58505 322 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 PSMD6Q15008 389 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 TAF11Q15544 211 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 GLE1Q53GS7 698 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 TMEM88Q6PEY1 159 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 RBM44Q6ZP01 1051 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 SRRM1Q8IYB3 904 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 SRFBP1Q8NEF9 429 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 OSR1Q8TAX0 266 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 NSUN4Q96CB9 384 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 ZCCHC17Q9NP64 241 aaKnown RBP4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 TMLHEQ9NVH6 421 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 GIMAP2Q9UG22 337 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 PCDHA10Q9Y5I2 948 aa4.84□□□□□ -1.63
HMGB1P48-201ENST00000446155 PCSK5Q92824 1860 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 EMSYQ7Z589 1322 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3DA0A087WVF3 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3IA0A087WXS9 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3EA0A087X179 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3KA0A087X1G2 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3BA6NDS4 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3FA6NER0 549 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TSPY2A6NKD2 308 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3LB9A6J9 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 KLK10O43240 276 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 PLAUP00749 431 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3HP0C7X1 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TSPY3P0CV98 308 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TSPY8P0CW00 308 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 ACADMP11310 421 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 EPHB2P29323 1055 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TACR3P29371 465 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 PGM1P36871 562 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 RCAN1P53805 252 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 SSBP2P81877 361 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 SHC2P98077 582 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TSPY1Q01534 308 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 DAZAP2Q15038 168 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 RILPL1Q5EBL4 403 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 NAA35Q5VZE5 725 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 PAPD7Q5XG87 772 aaKnown RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3GQ6DHY5 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3CQ6IPX1 549 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 ANO7Q6IWH7 933 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 KIAA1324Q6UXG2 1013 aaKnown RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 H1FNTQ75WM6 255 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 LRRC8DQ7L1W4 858 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 UBE2Q1Q7Z7E8 422 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 RHPN2Q8IUC4 686 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TBC1D3Q8IZP1 549 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 OR52N4Q8NGI2 321 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 ZFPM2Q8WW38 1151 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 DDB2Q92466 427 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 KTI12Q96EK9 354 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 SLF1Q9BQI6 1058 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 HTATIP2Q9BUP3 242 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 QTRT1Q9BXR0 403 aaKnown RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 PDCL3Q9H2J4 239 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 SFXN1Q9H9B4 322 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 ERVK-5Q9HDB9 667 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 TXNRD2Q9NNW7 524 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 ARL8BQ9NVJ2 186 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 MTMR4Q9NYA4 1195 aa4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 ADD3Q9UEY8 706 aaKnown RBP4.83□□□□□ -1.64
HMGB1P48-201ENST00000446155 CYP2D7A0A087X1C5 515 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 SMIM35A0A1B0GVV1 85 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 PABPN1LA6NDY0 278 aaKnown RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 GTPBP1O00178 669 aaKnown RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 AP3D1O14617 1153 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 INPPL1O15357 1258 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 HNRNPRO43390 633 aaKnown RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 PPFIA2O75334 1257 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 RNF8O76064 485 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 MLYCDO95822 493 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 F9P00740 461 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 CPA1P15085 419 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 PORP16435 677 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 ATP5F1P24539 256 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 MPGP29372 298 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 MAPK4P31152 587 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 MLH1P40692 756 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 HSF1Q00613 529 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 RNASELQ05823 741 aaKnown RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 ZNF268Q14587 947 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 WTAPQ15007 396 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 SUPT20HL1Q3ZLR7 823 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 SLC30A6Q6NXT4 461 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 MDGA2Q7Z553 956 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 CPLX4Q7Z7G2 160 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 NEK8Q86SG6 692 aa4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 RPAP2Q8IXW5 612 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P48-201ENST00000446155 PTGR2Q8N8N7 351 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms