RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 DPYSL3Q14195 570 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 HEATR6Q6AI08 1181 aaKnown RBP14.42□□□□□ -0.1
SSBP3-208ENST00000444533 TXNRD3NBQ6F5E7 133 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 ANO7Q6IWH7 933 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 VSIG1Q86XK7 387 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 CCDC50Q8IVM0 306 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 HMGB4Q8WW32 186 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 ARHGEF2Q92974 986 aaKnown RBP14.42□□□□□ -0.1
SSBP3-208ENST00000444533 PDLIM2Q96JY6 352 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 SPACA7Q96KW9 195 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 ACOX2Q99424 681 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 SP110Q9HB58 689 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 LZTFL1Q9NQ48 299 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 KLHL11Q9NVR0 708 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 HAUS2Q9NVX0 235 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 ZSCAN32Q9NX65 697 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 HYOU1Q9Y4L1 999 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 OR51B4Q9Y5P0 310 aa14.42□□□□□ -0.1
SSBP3-208ENST00000444533 MIF4GDA9UHW6 222 aaKnown RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ZNF487B1APH4 448 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 WASH3PC4AMC7 463 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 AXIN1O15169 862 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 KDELR3O43731 214 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 PALMO75781 387 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 SP9P0CG40 484 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 AMPD1P23109 780 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 PRKCHP24723 683 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 MSNP26038 577 aaKnown RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 CTSOP43234 321 aaPredicted RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 NUMBP49757 651 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ENPP2Q13822 863 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 TFDP2Q14188 446 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 PTPRNQ16849 979 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 HNRNPA1L2Q32P51 320 aaKnown RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ATP13A4Q4VNC1 1196 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 USP39Q53GS9 565 aaKnown RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ANKRD20A8PQ5CZ79 823 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 TSSK4Q6SA08 328 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 LONP2Q86WA8 852 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 LRRC49Q8IUZ0 686 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 RCOR2Q8IZ40 523 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 BBS5Q8N3I7 341 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 OR52K2Q8NGK3 314 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 CASKIN2Q8WXE0 1202 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 PRCCQ92733 491 aaPredicted RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ATOH1Q92858 354 aaPredicted RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ALG14Q96F25 216 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 CELF6Q96J87 481 aaKnown RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ACE2Q9BYF1 805 aaPredicted RBP14.41□□□□□ -0.1
SSBP3-208ENST00000444533 TMEM245Q9H330 911 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 NDFIP2Q9NV92 336 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ZNF212Q9UDV6 495 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 EBF1Q9UH73 591 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 NEU3Q9UQ49 428 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 HS3ST2Q9Y278 367 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 PPP2R2CQ9Y2T4 447 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 PCDHGA2Q9Y5H1 932 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 RAD54BQ9Y620 910 aa14.41□□□□□ -0.1
SSBP3-208ENST00000444533 ATG2BQ96BY7 2078 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 KMT2EQ8IZD2 1858 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 H0Y858 1186 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 ATP9BO43861 1147 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 BNIP3LO60238 219 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 SNAP91O60641 907 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 ZNF217O75362 1048 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 NEBLO76041 1014 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 HLA-EP13747 358 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 MX2P20592 715 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 CNR2P34972 360 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 ACVRL1P37023 503 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 STK19P49842 368 aaPredicted RBP14.4□□□□□ -0.1
SSBP3-208ENST00000444533 SERPINH1P50454 418 aaKnown RBP14.4□□□□□ -0.1
SSBP3-208ENST00000444533 DNA2P51530 1060 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 RWDD2BP57060 319 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 SERINC3Q13530 473 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 DLG2Q15700 870 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 TTC31Q49AM3 519 aaPredicted RBP14.4□□□□□ -0.1
SSBP3-208ENST00000444533 KIAA1324Q6UXG2 1013 aaKnown RBP14.4□□□□□ -0.1
SSBP3-208ENST00000444533 TMEM92Q6UXU6 159 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 ZNF662Q6ZS27 426 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 BZW1Q7L1Q6 419 aaKnown RBP14.4□□□□□ -0.1
SSBP3-208ENST00000444533 C11orf74Q86VG3 221 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 RFX6Q8HWS3 928 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 KATNAL2Q8IYT4 538 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 SH2D3CQ8N5H7 860 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 ATPAF2Q8N5M1 289 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 OR2T3Q8NH03 318 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 FAM71BQ8TC56 605 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 OR8D1Q8WZ84 308 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 RNF25Q96BH1 459 aaPredicted RBP14.4□□□□□ -0.1
SSBP3-208ENST00000444533 HMCESQ96FZ2 354 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 PSMB7Q99436 277 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 CEP44Q9C0F1 390 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 TRIM10Q9UDY6 481 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 SLCO3A1Q9UIG8 710 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 SALL4Q9UJQ4 1053 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 DOCK4Q8N1I0 1966 aa14.4□□□□□ -0.1
SSBP3-208ENST00000444533 GRID2IPA4D2P6 1211 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 TTC34A8MYJ7 566 aa14.39□□□□□ -0.11
SSBP3-208ENST00000444533 K7ESF4 209 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms