RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 CEP57Q86XR8 500 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 BRIX1Q8TDN6 353 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 DDI1Q8WTU0 396 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 MAIP1Q8WWC4 291 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 SEMA3CQ99985 751 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 TRIM62Q9BVG3 475 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 TLR10Q9BXR5 811 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 FRMD8P1Q9BZ68 369 aaPredicted RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 RIBC2Q9H4K1 309 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 AZI2Q9H6S1 392 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 RMND5AQ9H871 391 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 UNKLQ9H9P5 680 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 AGPAT3Q9NRZ7 376 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 AGPAT5Q9NUQ2 364 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 ARHGEF38Q9NXL2 777 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 ADAMTS6Q9UKP5 1117 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PCDHA4Q9UN74 947 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 NUDCQ9Y266 331 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 CFL2Q9Y281 166 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PLEKHA6Q9Y2H5 1048 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PCDHB2Q9Y5E7 798 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 U3KQV3 271 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 WIPF3A6NGB9 483 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 EIF3CLB5ME19 914 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 LRRN2O75325 713 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 ECI2O75521 394 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PRDM1O75626 825 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 KCNK5O95279 499 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 GLP2RO95838 553 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 F11P03951 625 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 THBDP07204 575 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 ANPEPP15144 967 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 CD27P26842 260 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 CORO1AP31146 461 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 FNTBP49356 437 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PLCD1P51178 756 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 GFPT1Q06210 699 aaPredicted RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 MALLQ13021 153 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 SMTNL2Q2TAL5 461 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 CLEC6AQ6EIG7 209 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 RBM43Q6ZSC3 357 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 SPARTQ8N0X7 666 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 DCBLD1Q8N8Z6 715 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 EXT2Q93063 718 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 FBXW5Q969U6 566 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 RBM41Q96IZ5 413 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 NECTIN4Q96NY8 510 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 EIF3CQ99613 913 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 SPZ1Q9BXG8 430 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 KCNF1Q9H3M0 494 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 DNAJC11Q9NVH1 559 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 IL37Q9NZH6 218 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 SOX13Q9UN79 622 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 RUVBL1Q9Y265 456 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 ST14Q9Y5Y6 855 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 B3GALT1Q9Y5Z6 326 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 POLA1P09884 1462 aaPredicted RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 C15orf38-AP3S2A0A0A6YYH1 394 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 SMIM30A4D0T7 59 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 RASGRF2O14827 1237 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 GMFGO60234 142 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 ACSL4O60488 711 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 CLEC3AO75596 197 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 TFRCP02786 760 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 TMEM253P0C7T8 217 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 ERVK-10P10266 1014 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 UROSP10746 265 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PRPS2P11908 318 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 ODC1P11926 461 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 HNRNPA2B1P22626 353 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 ADH6P28332 368 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 MCM7P33993 719 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 CDR1P51861 262 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 EPHB4P54760 987 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PRMT2P55345 433 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 BCAR1P56945 870 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 GPX6P59796 221 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 COTL1Q14019 142 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 BOP1Q14137 746 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 MED22Q15528 200 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 THEMIS2Q5TEJ8 643 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 ANKRD40Q6AI12 368 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 TICAM1Q8IUC6 712 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 MRPL41Q8IXM3 137 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 PPIL6Q8IXY8 311 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 USHBP1Q8N6Y0 703 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PI4KAP1Q8N8J0 262 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 DNAAF3Q8N9W5 541 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 RNF169Q8NCN4 708 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 DBF4BQ8NFT6 615 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 CDC26Q8NHZ8 85 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 WHAMMQ8TF30 809 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 PPP1R13LQ8WUF5 828 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 MRPS27Q92552 414 aaKnown RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 HOXB13Q92826 284 aaPredicted RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 TMCO6Q96DC7 493 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 CCDC51Q96ER9 411 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 LINC00615Q96LM1 132 aaPredicted RBP4.05□□□□□ -1.76
UBR3-206ENST00000444475 INTS14Q96SY0 518 aa4.05□□□□□ -1.76
UBR3-206ENST00000444475 MMP19Q99542 508 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms