RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SHOX2O60902 331 aaPredicted RBP6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 BCAS2O75934 225 aaPredicted RBP6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 RNF8O76064 485 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GGPS1O95749 300 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 TPBGLP0DKB5 382 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GLB1P16278 677 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ZFXP17010 805 aaPredicted RBP6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MALP21145 153 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 PRKACBP22694 351 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 EVI2BP34910 448 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 CCT4P50991 539 aaKnown RBP6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 SCNN1GP51170 649 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 PLCD1P51178 756 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 RAD23AP54725 363 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MYL6P60660 151 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GSTO1P78417 241 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 SNCBQ16143 134 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ARHGAP15Q53QZ3 475 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MIS18BP1Q6P0N0 1132 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GADL1Q6ZQY3 521 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MRPL10Q7Z7H8 261 aaKnown RBP6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 TMEM200AQ86VY9 491 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MICU3Q86XE3 530 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GATAD2AQ86YP4 633 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 APLFQ8IW19 511 aaPredicted RBP6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 DENND6AQ8IWF6 608 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 HDDC3Q8N4P3 179 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ZNF565Q8N9K5 539 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GPR156Q8NFN8 814 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 SLC22A8Q8TCC7 542 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 THAP4Q8WY91 577 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 VPS33AQ96AX1 596 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MRGPRX4Q96LA9 322 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 CDK5RAP1Q96SZ6 601 aaKnown RBP6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GORASP1Q9BQQ3 440 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 PDCD2LQ9BRP1 358 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 TRIM54Q9BYV2 358 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MAGEB5Q9BZ81 275 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ISCUQ9H1K1 167 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ADNPQ9H2P0 1102 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ADAM7Q9H2U9 754 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 BABAM1Q9NWV8 329 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 EHD3Q9NZN3 535 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ANGPTL2Q9UKU9 493 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 KLHL20Q9Y2M5 609 aa6.05□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MARF1Q9Y4F3 1742 aaKnown RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ZNF142P52746 1687 aaPredicted RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MSH6P52701 1360 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 IQANK1A0A1B0GTG1 560 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 TRIM43BA6NCK2 446 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GOLGA6L9A6NEM1 432 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 PRR5-ARHGAP8B1AHC4 643 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ACOT7O00154 380 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 CIDEAO60543 219 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 TBX10O75333 385 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ATP6V1G1O75348 118 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ALX3O95076 343 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 NTRK1P04629 796 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 RB1P06400 928 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 JUPP14923 745 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 KRT2P35908 639 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 PPARGP37231 505 aaPredicted RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MLH1P40692 756 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MAPKAPK2P49137 400 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 DHPSP49366 369 aaPredicted RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MAP3K7CLP57077 242 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 SESN2P58004 480 aaPredicted RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 CCZ1BP86790 482 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 CCZ1P86791 482 aaPredicted RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 PRKCZQ05513 592 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 RNASELQ05823 741 aaKnown RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 STK4Q13043 487 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 SLC13A2Q13183 592 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 RAB39AQ14964 217 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 KYNUQ16719 465 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 Q3ZCU0 254 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 SLC44A4Q53GD3 710 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 SNX30Q5VWJ9 437 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 CENPPQ6IPU0 288 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 CEP85Q6P2H3 762 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MTFR2Q6P444 385 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 ERICH5Q6P6B1 374 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 INTS5Q6P9B9 1019 aaKnown RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 UNC13DQ70J99 1090 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 TRIM43Q96BQ3 446 aaPredicted RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 HIST1H2AHQ96KK5 128 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 PRPF18Q99633 342 aaKnown RBP6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 HIST1H2AJQ99878 128 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 SH3GL2Q99962 352 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 GDF15Q99988 308 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 PARD6BQ9BYG5 372 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 NFKBIZQ9BYH8 718 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 AP5M1Q9H0R1 490 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 VPS16Q9H269 839 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 NDST4Q9H3R1 872 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 EPS8L2Q9H6S3 715 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MANSC1Q9H8J5 431 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 MLXIPQ9HAP2 919 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 C17orf75Q9HAS0 396 aa6.04□□□□□ -1.44
ALMS1-IT1-201ENST00000441587 TMEM8AQ9HCN3 771 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms