RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 MPZL3Q6UWV2 235 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 ZPBP2Q6X784 338 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 SERAC1Q96JX3 654 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 HIPK3Q9H422 1215 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 C20orf96Q9NUD7 363 aaPredicted RBP16.09■□□□□ 0.17
DHFR-201ENST00000439211 BMXP51813 675 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 AMHR2Q16671 573 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 HEATR6Q6AI08 1181 aaKnown RBP16.09■□□□□ 0.17
DHFR-201ENST00000439211 NANOGP8Q6NSW7 305 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 ADGRD1Q6QNK2 874 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 SULF1Q8IWU6 871 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 CLIP4Q8N3C7 705 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 NETO2Q8NC67 525 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 GMLQ99445 158 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.09■□□□□ 0.17
DHFR-201ENST00000439211 SPEF1Q9Y4P9 236 aa16.09■□□□□ 0.17
DHFR-201ENST00000439211 A0A1W2PQ67 120 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 E5RJQ4 531 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 AP1G1O43747 822 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 DLGAP3O95886 979 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 HMGCRP04035 888 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 ERBB2P04626 1255 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 GFAPP14136 432 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 ZNF182P17025 639 aaPredicted RBP16.08■□□□□ 0.17
DHFR-201ENST00000439211 GCAP28676 217 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 ZCCHC7Q8N3Z6 543 aaKnown RBP16.08■□□□□ 0.17
DHFR-201ENST00000439211 TMEM176AQ96HP8 235 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 CEP41Q9BYV8 373 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 SPC25Q9HBM1 224 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 CSADQ9Y600 493 aa16.08■□□□□ 0.17
DHFR-201ENST00000439211 CROCCQ5TZA2 2017 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 FARP2O94887 1054 aaPredicted RBP16.08■□□□□ 0.16
DHFR-201ENST00000439211 NFICP08651 508 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 NAT2P11245 290 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 RAD23AP54725 363 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 ADGRE1Q14246 886 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 KCTD2Q14681 263 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 SMU1Q2TAY7 513 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 ZFP1Q6P2D0 407 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 BNC2Q6ZN30 1099 aaPredicted RBP16.08■□□□□ 0.16
DHFR-201ENST00000439211 TMEM26Q6ZUK4 368 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 POLNQ7Z5Q5 900 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 CPNE9Q8IYJ1 553 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 CPB2Q96IY4 423 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 MAN1C1Q9NR34 630 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 NEMP1O14524 444 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 IDH3BO43837 385 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 CCDC159P0C7I6 412 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 CHRNB1P11230 501 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 CCNA2P20248 432 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 NDST2P52849 883 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 C16orf46Q6P387 395 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 DRICH1Q6PGQ1 229 aaPredicted RBP16.08■□□□□ 0.16
DHFR-201ENST00000439211 SCUBE3Q8IX30 993 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 BANPQ8N9N5 519 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 KIF12Q96FN5 646 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 PLEKHA5Q9HAU0 1116 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 ZNHIT2Q9UHR6 403 aa16.08■□□□□ 0.16
DHFR-201ENST00000439211 ZNF214Q9UL59 606 aaPredicted RBP16.08■□□□□ 0.16
DHFR-201ENST00000439211 ALDH2P05091 517 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 GRK2P25098 689 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 ADORA2BP29275 332 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 ARL2P36404 184 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 CLK3P49761 638 aaKnown RBP16.07■□□□□ 0.16
DHFR-201ENST00000439211 CRADDP78560 199 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 DNASE1L3Q13609 305 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 FAM47CQ5HY64 1035 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 FGD3Q5JSP0 725 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 OGFRL1Q5TC84 451 aaPredicted RBP16.07■□□□□ 0.16
DHFR-201ENST00000439211 C4orf22Q6V702 233 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 SLC15A4Q8N697 577 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 TERB1Q8NA31 727 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 ACO2Q99798 780 aaKnown RBP16.07■□□□□ 0.16
DHFR-201ENST00000439211 CNPY3Q9BT09 278 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 ANGPTL3Q9Y5C1 460 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 AKAP10O43572 662 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 CCNT2O60583 730 aaKnown RBP16.07■□□□□ 0.16
DHFR-201ENST00000439211 LCP1P13796 627 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 MOGQ16653 247 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 ACOT1Q86TX2 421 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 IGDCC3Q8IVU1 814 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 ALDH16A1Q8IZ83 802 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 C12orf29Q8N999 325 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 DNAAF3Q8N9W5 541 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 GRIN3AQ8TCU5 1115 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 CNTNAP2Q9UHC6 1331 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 C19orf81C9J6K1 198 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 AKAP14Q86UN6 197 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 RELL1Q8IUW5 271 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 SDR16C5Q8N3Y7 309 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 NAT8LQ8N9F0 302 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 GOLM1Q8NBJ4 401 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 CITED4Q96RK1 184 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 SMARCAD1Q9H4L7 1026 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 PLA2G4CQ9UP65 541 aa16.07■□□□□ 0.16
DHFR-201ENST00000439211 STAG3L1P0CL83 205 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 ARL4AP40617 200 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 NDST1P52848 882 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 COPZ1P61923 177 aa16.06■□□□□ 0.16
DHFR-201ENST00000439211 RPL10AP62906 217 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms