RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 DDIT4Q9NX09 232 aa14.19□□□□□ -0.14
PTCHD3-201ENST00000438700 MARCH5Q9NX47 278 aa14.19□□□□□ -0.14
PTCHD3-201ENST00000438700 SYBUQ9NX95 663 aa14.19□□□□□ -0.14
PTCHD3-201ENST00000438700 MARCOQ9UEW3 520 aaPredicted RBP14.19□□□□□ -0.14
PTCHD3-201ENST00000438700 MAGED2Q9UNF1 606 aaPredicted RBP14.19□□□□□ -0.14
PTCHD3-201ENST00000438700 PSAT1Q9Y617 370 aa14.19□□□□□ -0.14
PTCHD3-201ENST00000438700 SHROOM3Q8TF72 1996 aa14.19□□□□□ -0.14
PTCHD3-201ENST00000438700 SYN3O14994 580 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 KITP10721 976 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 MYL2P10916 166 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ERCC2P18074 760 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ADRA1BP35368 520 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 CCNFP41002 786 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 POLE2P56282 527 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 BST1Q10588 318 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ZCCHC23Q6ZST2 131 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 TTC7BQ86TV6 843 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 CCNJLQ8IV13 435 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 PSTKQ8IV42 348 aaKnown RBP14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ARNTL2Q8WYA1 636 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 IRGQQ8WZA9 623 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 WDR6Q9NNW5 1121 aaKnown RBP14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ETAA1Q9NY74 926 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ATP11BQ9Y2G3 1177 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 SNX10Q9Y5X0 201 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 MYO16Q9Y6X6 1858 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 KLHL33A6NCF5 533 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 NT5C1B-RDH14C9J2C7 533 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 DCLK1O15075 740 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 HOXA2O43364 376 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ALDH2P05091 517 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 F7P08709 466 aaPredicted RBP14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 GLUD2P49448 558 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 SLC5A3P53794 718 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 TPI1P60174 286 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 TSNAXIP1Q2TAA8 658 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 CTXN3Q4LDR2 81 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 LRRC8BQ6P9F7 803 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 SCN4BQ8IWT1 228 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 DCP1BQ8IZD4 617 aaKnown RBP14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 NPWQ8N729 165 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 MTBPQ96DY7 904 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 TOX2Q96NM4 488 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ANKRD27Q96NW4 1050 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 FERMT1Q9BQL6 677 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 COLEC11Q9BWP8 271 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 KLHL8Q9P2G9 620 aaPredicted RBP14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 BPTFQ12830 3046 aa14.18□□□□□ -0.14
PTCHD3-201ENST00000438700 ANKRD33BA6NCL7 494 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 TRAFD1O14545 582 aaPredicted RBP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 HAUS5O94927 633 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 CPA2P48052 419 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 RBBP5Q15291 538 aaKnown RBP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 RINLQ6ZS11 566 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 NUDCD3Q8IVD9 361 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 KBTBD2Q8IY47 623 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 E2F7Q96AV8 911 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 MRPL9Q9BYD2 267 aaKnown RBP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 WASF2Q9Y6W5 498 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 E2F8A0AVK6 867 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 GSC2O15499 205 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 ERVK-10P10266 1014 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 CDK16Q00536 496 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 PAFAH1B3Q15102 231 aaKnown RBP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 C16orf46Q6P387 395 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 ALYREFQ86V81 257 aaKnown RBP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 TMEM173Q86WV6 379 aaPredicted RBP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 ARID3BQ8IVW6 561 aaPredicted RBP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 STKLD1Q8NE28 680 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 OR52K1Q8NGK4 314 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 ARMCX1Q9P291 453 aa14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 SF3B1O75533 1304 aaKnown RBP eCLIP14.17□□□□□ -0.14
PTCHD3-201ENST00000438700 TNFRSF10BO14763 440 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 TPP1O14773 563 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 PARNO95453 639 aaKnown RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 ALDOAP04075 364 aaKnown RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 MLNP12872 115 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 GMPRP36959 345 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 VHLP40337 213 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 SERPINB9P50453 376 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 RASSF2P50749 326 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 COL4A4P53420 1690 aaPredicted RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 NIPAL4Q0D2K0 466 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 LBRQ14739 615 aaKnown RBP14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 SDHAF4Q5VUM1 108 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 STEAP4Q687X5 459 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 FUT10Q6P4F1 479 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 SCML4Q8N228 414 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 SKA1Q96BD8 255 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 ATXN7L3BQ96GX2 97 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 C20orf27Q9GZN8 174 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 TLE6Q9H808 572 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 TBX21Q9UL17 535 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 ALDH1A2O94788 518 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 TGDSO95455 350 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 GALTP07902 379 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 PGAM1P18669 254 aa14.16□□□□□ -0.14
PTCHD3-201ENST00000438700 FGFR3P22607 806 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms