RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 FAM171A1Q5VUB5 890 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 BBS12Q6ZW61 710 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 MRPL10Q7Z7H8 261 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 IGFN1Q86VF2 1251 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 C2CD4CQ8TF44 421 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 SCARB1Q8WTV0 552 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 NCSTNQ92542 709 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 KAT2AQ92830 837 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 SH3KBP1Q96B97 665 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZFYVE19Q96K21 471 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 TBATAQ96M53 351 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 REEP2Q9BRK0 252 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 TMEM79Q9BSE2 394 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 CADM1Q9BY67 442 aaKnown RBP4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 Q9N2J8 555 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 GGA3Q9NZ52 723 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 IFT80Q9P2H3 777 aaPredicted RBP4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 CD207Q9UJ71 328 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 CRYL1Q9Y2S2 319 aa4.01□□□□□ -1.77
TRAPPC13-204ENST00000438419 FOXO6A8MYZ6 492 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 KLK10O43240 276 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 NEURL1O76050 574 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 CYP19A1P11511 503 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-204ENST00000438419 ARHGAP8P85298 464 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 TLE2Q04725 743 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZBTB16Q05516 673 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 CHRNDQ07001 517 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 PMPCAQ10713 525 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 TBL3Q12788 808 aaKnown RBP4□□□□□ -1.77
TRAPPC13-204ENST00000438419 MTX1Q13505 466 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 C5orf22Q49AR2 442 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 ALG10Q5BKT4 473 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 ALG10BQ5I7T1 473 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 TMED8Q6PL24 325 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-204ENST00000438419 RNF144BQ7Z419 303 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZSCAN2Q7Z7L9 614 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-204ENST00000438419 CPOQ8IVL8 374 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4□□□□□ -1.77
TRAPPC13-204ENST00000438419 NANOGP1Q8N7R0 232 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 TEX19Q8NA77 164 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZNF48Q96MX3 618 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-204ENST00000438419 FRG2BQ96QU4 278 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 WDR83Q9BRX9 315 aaKnown RBP4□□□□□ -1.77
TRAPPC13-204ENST00000438419 IFT27Q9BW83 186 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 ACTR5Q9H9F9 607 aaPredicted RBP4□□□□□ -1.77
TRAPPC13-204ENST00000438419 THSD1Q9NS62 852 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 ELOVL5Q9NYP7 299 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 PDP2Q9P2J9 529 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 UPB1Q9UBR1 384 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 GJD2Q9UKL4 321 aa4□□□□□ -1.77
TRAPPC13-204ENST00000438419 TTBK1Q5TCY1 1321 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 TCRBV7S3A2A0A539 114 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 EYA2O00167 538 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 PEX12O00623 359 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 STRNO43815 780 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 DHX16O60231 1041 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 HBP1O60381 514 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 WEE2P0C1S8 567 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 PRF1P14222 555 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 GJC1P36383 396 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 VAMP2P63027 116 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 BYSLQ13895 437 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 RBMS2Q15434 407 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 SMTNL2Q2TAL5 461 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 C6orf10Q5SRN2 563 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 ATG16L1Q676U5 607 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 CCDC25Q86WR0 208 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 FAM185AQ8N0U4 392 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 ESX1Q8N693 406 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 ARFGAP1Q8N6T3 406 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 IL17REQ8NFR9 667 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 CENPIQ92674 756 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 MPP4Q96JB8 637 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 MAELQ96JY0 434 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 FRMD8Q9BZ67 464 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 STN1Q9H668 368 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 AAMDCQ9H7C9 122 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 ACAD9Q9H845 621 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 IL21RQ9HBE5 538 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 SPAG4Q9NPE6 437 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 RNF146Q9NTX7 359 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 PGAP2Q9UHJ9 254 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 DHDHQ9UQ10 334 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 AFG3L2Q9Y4W6 797 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 ZNF521Q96K83 1311 aa3.99□□□□□ -1.77
TRAPPC13-204ENST00000438419 A0A0G2JK05 382 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 LY6G6EA0A0G2JKS1 128 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 TMEM191BP0C7N4 346 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 FCGR2AP12318 317 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 SKIV2L2P42285 1042 aaKnown RBP3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 NR4A2P43354 598 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 CCR5P51681 352 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 LMOD3Q0VAK6 560 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 G3BP1Q13283 466 aaKnown RBP eCLIP3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 TRPC3Q13507 836 aa3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 INPP5JQ15735 1006 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-204ENST00000438419 WDR45BQ5MNZ6 344 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms