RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 RSRC2Q7L4I2 434 aaKnown RBP12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DSG4Q86SJ6 1040 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 ATCAYQ86WG3 371 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DTX1Q86Y01 620 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 DEPDC4Q8N2C3 294 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SSC4DQ8WTU2 575 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 SYAP1Q96A49 352 aaPredicted RBP12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 MYEOVQ96EZ4 313 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 PPP1R13BQ96KQ4 1090 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 RPL10LQ96L21 214 aaKnown RBP12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 AK8Q96MA6 479 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 CCDC3Q9BQI4 270 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 STOML2Q9UJZ1 356 aa12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NOVA2Q9UNW9 492 aaKnown RBP12.71□□□□□ -0.37
SMAD9-IT1-201ENST00000437983 NF1P21359 2839 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 RNGTTO60942 597 aaKnown RBP12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 GAP43P17677 238 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 GNLYP22749 145 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ETV5P41161 510 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 CASP4P49662 377 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 TAS2R38P59533 333 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 CNTN1Q12860 1018 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 PSMD6Q15008 389 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 SNRNP35Q16560 246 aaKnown RBP12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ZNF699Q32M78 642 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 FSCBQ5H9T9 825 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ZNF667Q5HYK9 610 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ADGRF1Q5T601 910 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 FHL5Q5TD97 284 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 GCNT7Q6ZNI0 430 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ZNF592Q92610 1267 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 CYFIP2Q96F07 1278 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 PREBQ9HCU5 417 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 PNPLA8Q9NP80 782 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 OLFML3Q9NRN5 406 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 SFMBT1Q9UHJ3 866 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 TUBD1Q9UJT1 453 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 SCN8AQ9UQD0 1980 aa12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 NYNRINQ9P2P1 1898 aaKnown RBP12.7□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ITIH6Q6UXX5 1313 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 KIAA0391O15091 583 aaKnown RBP12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 PHACTR2O75167 634 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ASLP04424 464 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 SLC6A4P31645 630 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 HOXD13P35453 343 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 STK19P49842 368 aaPredicted RBP12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 OXCT1P55809 520 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 MCCD1P59942 119 aaPredicted RBP12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 HNRNPKP61978 463 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 YWHAGP61981 247 aaKnown RBP eCLIP12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 CYP24A1Q07973 514 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 FZD2Q14332 565 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 PIK3R6Q5UE93 754 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 Q6ZSR6 202 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 MFN1Q8IWA4 741 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 SLC35F3Q8IY50 421 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 FAM184AQ8NB25 1140 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 C9orf43Q8TAL5 461 aaPredicted RBP12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 FIBINQ8TAL6 211 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 PLEKHO2Q8TD55 490 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 SALL4Q9UJQ4 1053 aa12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 RP1L1Q8IWN7 2480 aaPredicted RBP12.69□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 A0A1W2PQU0 124 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 SLC7A4O43246 635 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 AQP9O43315 295 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 MSI1O43347 362 aaKnown RBP12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 VNN1O95497 513 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 CSF2P04141 144 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 NEFLP07196 543 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 JMJD7P0C870 316 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 IDEP14735 1019 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 GRNP28799 593 aaKnown RBP12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 EIF3IQ13347 325 aaKnown RBP12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ELAVL3Q14576 367 aaKnown RBP12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ZNF284Q2VY69 593 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 RILPL1Q5EBL4 403 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 PITRM1Q5JRX3 1037 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 CAPRIN2Q6IMN6 1127 aaKnown RBP12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 THSD4Q6ZMP0 1018 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ABI3BPQ7Z7G0 1075 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 KDM1BQ8NB78 822 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 LMX1AQ8TE12 382 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 USP7Q93009 1102 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 IFT43Q96FT9 208 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 BMFQ96LC9 184 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 LOXL2Q9Y4K0 774 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 PCDHB11Q9Y5F2 797 aa12.68□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 C9orf172C9J069 976 aa12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 CLDN1O95832 211 aa12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 SRPRAP08240 638 aaKnown RBP12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 NME1P15531 152 aaKnown RBP12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 NEK4P51957 841 aa12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 ZNF445P59923 1031 aa12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 RPS24P62847 133 aaKnown RBP12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 BIRC3Q13489 604 aa12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 NCOA4Q13772 614 aa12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 CRTC2Q53ET0 693 aaPredicted RBP12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 FAM133BQ5BKY9 247 aaKnown RBP12.67□□□□□ -0.38
SMAD9-IT1-201ENST00000437983 TPRG1LQ5T0D9 272 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms