RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 MYO7AQ13402 2215 aa21.56■■□□□ 1.04
PTPRF-207ENST00000436724 ZNF189O75820 626 aaPredicted RBP21.55■■□□□ 1.04
PTPRF-207ENST00000436724 QPCTQ16769 361 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 KLHL38Q2WGJ6 581 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 TRMT10BQ6PF06 316 aaKnown RBP21.55■■□□□ 1.04
PTPRF-207ENST00000436724 PSRC1Q6PGN9 363 aaPredicted RBP21.55■■□□□ 1.04
PTPRF-207ENST00000436724 ARNTL2Q8WYA1 636 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 CYTH2Q99418 400 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 TCF25Q9BQ70 676 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 TRPC7Q9HCX4 862 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 PSMC3IPQ9P2W1 217 aaPredicted RBP21.55■■□□□ 1.04
PTPRF-207ENST00000436724 HIDE1A8MVS5 230 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 F5H5T6 163 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 MT-CYBP00156 380 aaPredicted RBP21.55■■□□□ 1.04
PTPRF-207ENST00000436724 OR1E1P30953 314 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 CORO1AP31146 461 aaKnown RBP21.55■■□□□ 1.04
PTPRF-207ENST00000436724 NDST2P52849 883 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 MICALCLQ6ZW33 695 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 YTHDF3Q7Z739 585 aaKnown RBP21.55■■□□□ 1.04
PTPRF-207ENST00000436724 ZNF354CQ86Y25 554 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 DHRS4Q9BTZ2 278 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 IL21Q9HBE4 155 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 SYBUQ9NX95 663 aa21.55■■□□□ 1.04
PTPRF-207ENST00000436724 SDR42E2A6NKP2 422 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 CXorf49A8MYA2 514 aaPredicted RBP21.54■■□□□ 1.04
PTPRF-207ENST00000436724 PEX11BO96011 259 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 F11P03951 625 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 HLA-DQB2P05538 268 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 KRT15P19012 456 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 DNAJB1P25685 340 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 TXNDC8Q6A555 127 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 UNC5BQ8IZJ1 945 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 OTUD6BQ8N6M0 293 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 DCAKDQ8WVC6 231 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 STAMBPL1Q96FJ0 436 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 CNOT10Q9H9A5 744 aaKnown RBP21.54■■□□□ 1.04
PTPRF-207ENST00000436724 SMYD2Q9NRG4 433 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 RBM22Q9NW64 420 aaKnown RBP eCLIP21.54■■□□□ 1.04
PTPRF-207ENST00000436724 TMEM120BA0PK00 339 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 SPAG6O75602 509 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 BRAFP15056 766 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 CTNNB1P35222 781 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 MSH2P43246 934 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 RPS24P62847 133 aaKnown RBP21.54■■□□□ 1.04
PTPRF-207ENST00000436724 MPP2Q14168 576 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 TIGD7Q6NT04 549 aaPredicted RBP21.54■■□□□ 1.04
PTPRF-207ENST00000436724 ADGRD1Q6QNK2 874 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 TRABD2AQ86V40 505 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 GPR65Q8IYL9 337 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 SP7Q8TDD2 431 aaPredicted RBP21.54■■□□□ 1.04
PTPRF-207ENST00000436724 KLHL5Q96PQ7 755 aa21.54■■□□□ 1.04
PTPRF-207ENST00000436724 KLF16Q9BXK1 252 aaPredicted RBP21.54■■□□□ 1.04
PTPRF-207ENST00000436724 ZFP37Q9Y6Q3 630 aaPredicted RBP21.54■■□□□ 1.04
PTPRF-207ENST00000436724 A0A1W2PPM1 405 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 FAM155BO75949 473 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 SUN1O94901 812 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 ACVRL1P37023 503 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 SLC11A2P49281 568 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 SGSHP51688 502 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 ZXDBP98169 803 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 SMAD1Q15797 465 aaKnown RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 PLPP4Q5VZY2 271 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 LILRA6Q6PI73 481 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 CTAGE3PQ8IX95 158 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 HS6ST3Q8IZP7 471 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 DNAAF3Q8N9W5 541 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 TTC16Q8NEE8 873 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 HERVK_113Q902F9 699 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 CENPTQ96BT3 561 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 PABPC5Q96DU9 382 aaKnown RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 PRICKLE1Q96MT3 831 aaPredicted RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 KCNK9Q9NPC2 374 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 ENTPD7Q9NQZ7 604 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 FETUBQ9UGM5 382 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 NRG2O14511 850 aaPredicted RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 RAMP2O60895 175 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 KIAA0754O94854 1291 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 MBL2P11226 248 aaPredicted RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 STX2P32856 288 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 CREMQ03060 361 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 POLD3Q15054 466 aaPredicted RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 CES3Q6UWW8 571 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 PPM1NQ8N819 430 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 ARL14EPQ8N8R7 260 aaPredicted RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 OR52K2Q8NGK3 314 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 GSDMBQ8TAX9 411 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 MGARPQ8TDB4 240 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 PLD4Q96BZ4 506 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 GLOD4Q9HC38 313 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 MLXIPLQ9NP71 852 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 UXTQ9UBK9 157 aaPredicted RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 AGO1Q9UL18 857 aaKnown RBP21.53■■□□□ 1.04
PTPRF-207ENST00000436724 PCDHA11Q9Y5I1 949 aa21.53■■□□□ 1.04
PTPRF-207ENST00000436724 BPTFQ12830 3046 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 CACNG3O60359 315 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 UGT1A9O60656 530 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 ARHGEF15O94989 841 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 MYOGP15173 224 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 BMPR1AP36894 532 aa21.52■■□□□ 1.04
PTPRF-207ENST00000436724 CYP4F8P98187 520 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms