RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 C3orf58Q8NDZ4 430 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 CFAP61Q8NHU2 1237 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 TTC1Q99614 292 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 PTPN18Q99952 460 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 DDX43Q9NXZ2 648 aaKnown RBP10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 VANGL2Q9ULK5 521 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 GNEQ9Y223 722 aaKnown RBP10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 LOC100653049A0A140TA62 436 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 KRT34O76011 436 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 PNPLA4P41247 253 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 CCR10P46092 362 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 CDK18Q07002 472 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 SFSWAPQ12872 951 aaKnown RBP10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 STXBP5Q5T5C0 1151 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 C1orf146Q5VVC0 180 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 TWF2Q6IBS0 349 aaKnown RBP10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 ZNF781Q8N8C0 355 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 DNAAF3Q8N9W5 541 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 PHC3Q8NDX5 983 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 CEP70Q8NHQ1 597 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 MAPK15Q8TD08 544 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 NMD3Q96D46 503 aaKnown RBP10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 PCED1BQ96HM7 432 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 PAAF1Q9BRP4 392 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 TXNDC16Q9P2K2 825 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 STAP1Q9ULZ2 295 aa10.63□□□□□ -0.71
CLSTN1-203ENST00000435891 GABRDO14764 452 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 PDE5AO76074 875 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 TMCC1O94876 653 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 LTFP02788 710 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 NCAM1P13591 858 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 FUT4P22083 530 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 DAOAP59103 153 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 CMPK2Q5EBM0 449 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 RNF111Q6ZNA4 994 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 USP50Q70EL3 339 aaPredicted RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 PSTKQ8IV42 348 aaKnown RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 ATP2A3Q93084 1043 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 CELF6Q96J87 481 aaKnown RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 RBBP8Q99708 897 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 DDIT4Q9NX09 232 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 APOBEC2Q9Y235 224 aaKnown RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 HTTP42858 3142 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 AP2A1O95782 977 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 ANPEPP15144 967 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 TPI1P60174 286 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 ABCE1P61221 599 aaKnown RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 KCTD11Q693B1 232 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 IRGCQ6NXR0 463 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 NET1Q7Z628 596 aaPredicted RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 TMEM135Q86UB9 458 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 TLK2Q86UE8 772 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 OR6Y1Q8NGX8 325 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 KCTD13Q8WZ19 329 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 LPPQ93052 612 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 CYP4F11Q9HBI6 524 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 SOX13Q9UN79 622 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 ZBTB14O43829 449 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 CPA3P15088 417 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 NFKB1P19838 968 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 PPP2R5DQ14738 602 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 MAP7D1Q3KQU3 841 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 ANKRD20A4Q4UJ75 823 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 DNAJC14Q6Y2X3 702 aaPredicted RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 ARHGAP24Q8N264 748 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 TOP6BLQ8N6T0 577 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 ZNF419Q96HQ0 510 aaPredicted RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 PPP1R36Q96LQ0 422 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 PPP1R10Q96QC0 940 aaKnown RBP10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 CPNE1Q99829 537 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 MIOSQ9NXC5 875 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 ASB3Q9Y575 518 aa10.62□□□□□ -0.71
CLSTN1-203ENST00000435891 G3V2L1 256 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 BAG2O95816 211 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 MAGEA12P43365 314 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 EPHB1P54762 984 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CCL14Q16627 93 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 SLC9B1Q4ZJI4 515 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 SPANXN3Q5MJ09 141 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 BHLHA9Q7RTU4 235 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 PLEKHH3Q7Z736 793 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 APLFQ8IW19 511 aaPredicted RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 ZC3H15Q8WU90 426 aaKnown RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 PYDC1Q8WXC3 89 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CCDC124Q96CT7 223 aaKnown RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 SENP8Q96LD8 212 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 NAT9Q9BTE0 207 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 LRRC40Q9H9A6 602 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 SF3B1O75533 1304 aaKnown RBP eCLIP10.61□□□□□ -0.716e-6■■■■■ 103.4
CLSTN1-203ENST00000435891 A0A096LPK6 155 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 ARHGAP42A6NI28 874 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 E9PBE3 544 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 F8W8V4 182 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 KLHL41O60662 606 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 NCF2P19878 526 aaPredicted RBP10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CYP2B6P20813 491 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 NMBRP28336 390 aa10.61□□□□□ -0.71
CLSTN1-203ENST00000435891 CLCNKBP51801 687 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms